RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PCYT1AP49585 367 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 MMGT1Q8N4V1 131 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 CASKIN2Q8WXE0 1202 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 PBXIP1Q96AQ6 731 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 ERP44Q9BS26 406 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 OSBPL8Q9BZF1 889 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 TASP1Q9H6P5 420 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 PJA2O43164 708 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 HSD17B3P37058 310 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 CDK17Q00537 523 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 MTHFD1LQ6UB35 978 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 TTC30AQ86WT1 665 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
NPHP4-209ENST00000489180 CCT8L1PA6NM43 557 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 B2RBV5 119 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 GNL1P36915 607 aaPredicted RBP18.49■□□□□ 0.55
NPHP4-209ENST00000489180 KLHDC7AQ5VTJ3 777 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 ANKS1AQ92625 1134 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 CHCHD3Q9NX63 227 aaKnown RBP18.49■□□□□ 0.55
NPHP4-209ENST00000489180 PDGFRBP09619 1106 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 USP10Q14694 798 aaKnown RBP18.49■□□□□ 0.55
NPHP4-209ENST00000489180 ENGASEQ8NFI3 743 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 MTBPQ96DY7 904 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 SGSM3Q96HU1 749 aa18.49■□□□□ 0.55
NPHP4-209ENST00000489180 NDUFB10O96000 172 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 TMEM253P0C7T8 217 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 EFNA5P52803 228 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 ZNF710Q8N1W2 664 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 NFKBIAP25963 317 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 TTC39CQ8N584 583 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 LZICQ8WZA0 190 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 SFMBT1Q9UHJ3 866 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 NFIXQ14938 502 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 DNAL1Q4LDG9 190 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 IFNEQ86WN2 208 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 CD248Q9HCU0 757 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 C20orf96Q9NUD7 363 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 DUSP10Q9Y6W6 482 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 CYGBQ8WWM9 190 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 NR1H4Q96RI1 486 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 PRDM5Q9NQX1 630 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 ZNF229Q9UJW7 825 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 CD44P16070 742 aaKnown RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 KLC1Q07866 573 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 CATSPER1Q8NEC5 780 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 ZMAT2Q96NC0 199 aaKnown RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
NPHP4-209ENST00000489180 PIN4Q9Y237 131 aaKnown RBP18.48■□□□□ 0.55
NPHP4-209ENST00000489180 CDC42BPBQ9Y5S2 1711 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 CPB1P15086 417 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 BAATQ14032 418 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 INPP5AQ14642 412 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 PRPF39Q86UA1 669 aaKnown RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 DNAJC9Q8WXX5 260 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 EME1Q96AY2 570 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 EPAS1Q99814 870 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 A2ML1A8K2U0 1454 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 TLR2O60603 784 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 PDHBP11177 359 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 GRIK1P39086 918 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 SERPINB4P48594 390 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 HSD17B4P51659 736 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 TRIP10Q15642 601 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 EDRF1Q3B7T1 1238 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 CYP4A22Q5TCH4 519 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 URGCPQ8TCY9 931 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 ZNF560Q96MR9 790 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 C3orf70A6NLC5 250 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 FOXP2O15409 715 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 CCND1P24385 295 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 PIGHQ14442 188 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 FAM107AO95990 144 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 HLA-DRAP01903 254 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 COILP38432 576 aaPredicted RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 PLA2G4AP47712 749 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 KIZQ2M2Z5 673 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 THAP11Q96EK4 314 aa18.47■□□□□ 0.55
NPHP4-209ENST00000489180 MRPL1Q9BYD6 325 aaKnown RBP18.47■□□□□ 0.55
NPHP4-209ENST00000489180 DGAT1O75907 488 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 MYO1DO94832 1006 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 UBA3Q8TBC4 463 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 SPATA18Q8TC71 538 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PTPRN2Q92932 1015 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 MANSC1Q9H8J5 431 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 FAM49BQ9NUQ9 324 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 LOC100653049A0A140TA62 436 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PRPF4O43172 522 aaKnown RBP eCLIP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 KRT34O76011 436 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 RASA1P20936 1047 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 TARSP26639 723 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 TBCCQ15814 346 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PCSK7Q16549 785 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 LRRC34Q8IZ02 419 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 TBC1D16Q8TBP0 767 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms