RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 C3orf58Q8NDZ4 430 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 CACTINQ8WUQ7 758 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 CLSTN3Q9BQT9 956 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 FAM213AQ9BRX8 229 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 OXCT2Q9BYC2 517 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 ASB7Q9H672 318 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 WDR6Q9NNW5 1121 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 FBXW11Q9UKB1 542 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 FBXL21Q9UKT6 434 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 DERAQ9Y315 318 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 TTC26A0AVF1 554 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 ASGR2P07307 311 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
HDAC6-232ENST00000489053 DNM1Q05193 864 aaKnown RBP9.89□□□□□ -0.83
HDAC6-232ENST00000489053 IQCEQ6IPM2 695 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 RTL10Q7L3V2 364 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 HS2ST1Q7LGA3 356 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 GRASPQ7Z6J2 395 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-232ENST00000489053 KCNN1Q92952 543 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 DNAJC19Q96DA6 116 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 RHOBTB2Q9BYZ6 727 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 CYP4F11Q9HBI6 524 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 DPP3Q9NY33 737 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 RBAKQ9NYW8 714 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-232ENST00000489053 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
HDAC6-232ENST00000489053 DSEQ9UL01 958 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 KCNH3Q9ULD8 1083 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
HDAC6-232ENST00000489053 TDRD15B5MCY1 1934 aaKnown RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 GOLGA6L4A6NEF3 574 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 STK25O00506 426 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 KIAA0391O15091 583 aaKnown RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 NFICP08651 508 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 TMEM191BP0C7N4 346 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 GARTP22102 1010 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 LRPAP1P30533 357 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 HOXA9P31269 272 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PNPLA4P41247 253 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 AFMP43652 599 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ROR1Q01973 937 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PLD1Q13393 1074 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 TDGQ13569 410 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 TAF12Q16514 161 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 SV2CQ496J9 727 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PABPC1LQ4VXU2 614 aaKnown RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 FAM26FQ5R3K3 315 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 SPATA1Q5VX52 437 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 RESP18Q5W5W9 173 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 TPGS2Q68CL5 300 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 OVOS1Q6IE37 1185 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 LILRA6Q6PI73 481 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 THEM5Q8N1Q8 247 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF707Q96C28 371 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 SAAL1Q96ER3 474 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 TRIM9Q9C026 710 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 HAPLN2Q9GZV7 340 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 SCAND2PQ9GZW5 306 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PCIF1Q9H4Z3 704 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 EXOC1Q9NV70 894 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 IGSF9Q9P2J2 1179 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 FBXL5Q9UKA1 691 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 PCDHA7Q9UN72 937 aa9.88□□□□□ -0.83
HDAC6-232ENST00000489053 MRPS23Q9Y3D9 190 aaKnown RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 ZFP37Q9Y6Q3 630 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-232ENST00000489053 A0A087X0B3 334 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 GOLGA8IPA6NC78 632 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 OR6C75A6NL08 312 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 GOLGA8JA6NMD2 632 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 TISP43B9A030 160 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 ADAM12O43184 909 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 EXTL3O43909 919 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 TNNC2P02585 160 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 KRT19P08727 400 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 ALDH1A3P47895 512 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 TAF6P49848 677 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 POU5F1Q01860 360 aaKnown RBP9.87□□□□□ -0.83
HDAC6-232ENST00000489053 PKP1Q13835 747 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 SURF1Q15526 300 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 CYP4A22Q5TCH4 519 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 SLC8B1Q6J4K2 584 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 HFE2Q6ZVN8 426 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 MTSS1LQ765P7 747 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms