RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MSCO60682 206 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 ICAM1P05362 532 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 RNASE1P07998 156 aaKnown RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 ALAS1P13196 640 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 RXRAP19793 462 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 LTBRP36941 435 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 RGS2P41220 211 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 NEK4P51957 841 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 SNAP25P60880 206 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 GABREP78334 506 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 AAK1Q2M2I8 961 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 CPLX2Q6PUV4 134 aaKnown RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 DPP9Q86TI2 863 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 ABRAQ8N0Z2 381 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 ANKRD35Q8N283 1001 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 KREMEN2Q8NCW0 462 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 TIFAQ96CG3 184 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 RRP36Q96EU6 259 aaKnown RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 IL17RAQ96F46 866 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 DDX11Q96FC9 970 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 CHAMP1Q96JM3 812 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 AGXT2Q9BYV1 514 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 ACAD9Q9H845 621 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 MBNL3Q9NUK0 354 aaKnown RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 SEC63Q9UGP8 760 aaKnown RBP9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 PARP14Q460N5 1801 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 RLFQ13129 1914 aa9.19□□□□□ -0.94
TRAPPC12-221ENST00000489032 A0A0G2JMZ2 1700 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 BLACEA4D250 179 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 FADS2P1A8MWK0 482 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 EFCAB14O75071 495 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 MRE11P49959 708 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 AKAP17AQ02040 695 aaKnown RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 CCL14Q16627 93 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 GALNT18Q6P9A2 607 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 SLC39A5Q6ZMH5 540 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 MAMDC2Q7Z304 686 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 RAB11FIP4Q86YS3 637 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 ZNF274Q96GC6 653 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 SPZ1Q9BXG8 430 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 AMNQ9BXJ7 453 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 MRPL4Q9BYD3 311 aaKnown RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 CPVLQ9H3G5 476 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 PRDM12Q9H4Q4 367 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 JMJD4Q9H9V9 463 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 RNF146Q9NTX7 359 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 DDX20Q9UHI6 824 aaKnown RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 ADAMTS6Q9UKP5 1117 aa9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 MRPL11Q9Y3B7 192 aaKnown RBP9.18□□□□□ -0.94
TRAPPC12-221ENST00000489032 MYO9BQ13459 2157 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ZNF536O15090 1300 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ABCB11O95342 1321 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TRIM43BA6NCK2 446 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 AQP7O14520 342 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 CPLX1O14810 134 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 PLD2O14939 933 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ZBTB5O15062 677 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 NAT1P18440 290 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ADORA2AP29274 412 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 CNGA1P29973 690 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 AFMP43652 599 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 GRB14Q14449 540 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 RABEP1Q15276 862 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 QRICH1Q2TAL8 776 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 USH1GQ495M9 461 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TRIM60Q495X7 471 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 MFSD14CQ5VZR4 134 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 RSPO2Q6UXX9 243 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TMEM52Q8NDY8 209 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 PIBF1Q8WXW3 757 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 USP6NLQ92738 828 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 TRIM43Q96BQ3 446 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 C1orf159Q96HA4 380 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 G6PC3Q9BUM1 346 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 RIOX1Q9H6W3 641 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 NCOA5Q9HCD5 579 aaKnown RBP9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 NDOR1Q9UHB4 597 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 SFMBT1Q9UHJ3 866 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 MUC6Q6W4X9 2439 aa9.17□□□□□ -0.94
TRAPPC12-221ENST00000489032 KBTBD13C9JR72 458 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 CDKL5O76039 1030 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PLEKHA8P1O95397 391 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PDIA3P30101 505 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 AK2P54819 239 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 EVCP57679 992 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 CCT2P78371 535 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 CYP4F3Q08477 520 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 SNX17Q15036 470 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 LILRA2Q8N149 483 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms