RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 OR52N2Q8NGI0 321 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 ZCRB1Q8TBF4 217 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 AUTS2Q8WXX7 1259 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 SSH1Q8WYL5 1049 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 CEP95Q96GE4 821 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 AHCYL2Q96HN2 611 aaKnown RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 RAX2Q96IS3 184 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 EPC1Q9H2F5 836 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 MMRN2Q9H8L6 949 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 PARPBPQ9NWS1 579 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 GPRC5DQ9NZD1 345 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 GPRC5BQ9NZH0 403 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 SRRDQ9UH36 339 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 TRPS1Q9UHF7 1281 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 DDX19BQ9UMR2 479 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 TNNQ9UQP3 1299 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 PTPRUQ92729 1446 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 AKAP12Q02952 1782 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 DIP2AQ14689 1571 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 MON2Q7Z3U7 1717 aa3.5□□□□□ -1.85
CALD1-221ENST00000489019 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.5□□□□□ -1.85
CALD1-221ENST00000489019 RIMS1Q86UR5 1692 aaKnown RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 RPTORQ8N122 1335 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 NR4A1P22736 598 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 APBA1Q02410 837 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 EIF4A2Q14240 407 aaKnown RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 MST1LQ2TV78 715 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 TWISTNBQ3B726 338 aaPredicted RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 RABL3Q5HYI8 236 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 PRAMEF14Q5SWL7 426 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 RNF219Q5W0B1 726 aaPredicted RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 ATF7IPQ6VMQ6 1270 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 DOK3Q7L591 496 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 GPRIN1Q7Z2K8 1008 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 FAM83AQ86UY5 434 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 REPS2Q8NFH8 660 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 MDM1Q8TC05 714 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 RIN2Q8WYP3 895 aaPredicted RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 PHACTR3Q96KR7 559 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 PDCD2LQ9BRP1 358 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 THUMPD2Q9BTF0 503 aaKnown RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 TRIM8Q9BZR9 551 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 UPF2Q9HAU5 1272 aaKnown RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 PCDH12Q9NPG4 1184 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 DMRT3Q9NQL9 472 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 CCM2LQ9NUG4 571 aaPredicted RBP3.49□□□□□ -1.85
CALD1-221ENST00000489019 USP6P35125 1406 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 SLIT1O75093 1534 aa3.49□□□□□ -1.85
CALD1-221ENST00000489019 ARHGAP23Q9P227 1491 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 CEP170BQ9Y4F5 1589 aaPredicted RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 PTCH1Q13635 1447 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 GOLGA6L6A8MZA4 724 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 K7ESF4 209 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 RPS6KA4O75676 772 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 OSMP13725 252 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 TRIM27P14373 513 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 CPEP16870 476 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 ZFP36P26651 326 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 ADSLP30566 484 aaPredicted RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 MTNR1BP49286 362 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 PPP3CAQ08209 521 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 ABHD18Q0P651 414 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 DCTN1Q14203 1278 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 VPS72Q15906 364 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 HSP90AB2PQ58FF8 381 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 METTL24Q5JXM2 366 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 MFSD14BQ5SR56 506 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 BTNL9Q6UXG8 535 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 USP51Q70EK9 711 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 DDX42Q86XP3 938 aaKnown RBP eCLIP3.48□□□□□ -1.85
CALD1-221ENST00000489019 SYT12Q8IV01 421 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 TMEM57Q8N5G2 664 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 FBXO18Q8NFZ0 1043 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 ATL2Q8NHH9 583 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 SLC35B2Q8TB61 432 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 ZNF483Q8TF39 744 aaPredicted RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 LARP4BQ92615 738 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 HOXB13Q92826 284 aaPredicted RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 LTV1Q96GA3 475 aaPredicted RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 CDC5LQ99459 802 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 API5Q9BZZ5 524 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 KCNH6Q9H252 994 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 ZNF768Q9H5H4 540 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 IFT122Q9HBG6 1241 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 METTL14Q9HCE5 456 aaKnown RBP3.48□□□□□ -1.85
CALD1-221ENST00000489019 SORCS3Q9UPU3 1222 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 TOPAZ1Q8N9V7 1692 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 PIK3R4Q99570 1358 aa3.48□□□□□ -1.85
CALD1-221ENST00000489019 MAP3K19Q56UN5 1328 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 NRKQ7Z2Y5 1582 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 OVOS2A0A0J9YW53 1432 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 OVOS2Q6IE36 1432 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 ANKARQ7Z5J8 1434 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 AHRRA9YTQ3 701 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 LEFTY2O00292 366 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 AKR1B10O60218 316 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 PARNO95453 639 aaKnown RBP3.47□□□□□ -1.85
CALD1-221ENST00000489019 PEX11BO96011 259 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 GASTP01350 101 aa3.47□□□□□ -1.85
CALD1-221ENST00000489019 APOBEC3AP31941 199 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms