RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 FNBP1Q96RU3 617 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 IRAK3Q9Y616 596 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.215e-7■■■■■ 28.6
FDPS-213ENST00000489003 VWA8A3KMH1 1905 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 PER2O15055 1255 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 TRAPPC3O43617 180 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 FGFR3P22607 806 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 DLG4P78352 724 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 CLDN10P78369 228 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 ELAVL2Q12926 359 aaKnown RBP16.38■□□□□ 0.21
FDPS-213ENST00000489003 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 RTP2Q5QGT7 225 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 TTI2Q6NXR4 508 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 RBM23Q86U06 439 aaKnown RBP16.38■□□□□ 0.21
FDPS-213ENST00000489003 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 MAFAQ8NHW3 353 aaPredicted RBP16.38■□□□□ 0.21
FDPS-213ENST00000489003 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 MED15Q96RN5 788 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 MTMR12Q9C0I1 747 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 IGFLR1Q9H665 355 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 TLE6Q9H808 572 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 MRPL17Q9NRX2 175 aaKnown RBP16.38■□□□□ 0.21
FDPS-213ENST00000489003 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 AGAP1Q9UPQ3 857 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 CTNND2Q9UQB3 1225 aa16.38■□□□□ 0.21
FDPS-213ENST00000489003 BICDL2A1A5D9 508 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
FDPS-213ENST00000489003 C2CD2LO14523 706 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 SPTLC1O15269 473 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
FDPS-213ENST00000489003 TNNC2P02585 160 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
FDPS-213ENST00000489003 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.213e-8■■■□□ 17.1
FDPS-213ENST00000489003 GLUD2P49448 558 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.21
FDPS-213ENST00000489003 RBP5P82980 135 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 HYAL1Q12794 435 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 PAK1Q13153 545 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 C1orf220Q5T0J3 134 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 CCDC183Q5T5S1 534 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 KIAA1841Q6NSI8 718 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 CEP57Q86XR8 500 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
FDPS-213ENST00000489003 RIN2Q8WYP3 895 aaPredicted RBP16.37■□□□□ 0.21
FDPS-213ENST00000489003 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 SUSD3Q96L08 255 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 TTPALQ9BTX7 342 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 MKNK1Q9BUB5 465 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 RXFP1Q9HBX9 757 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 SSX2IPQ9Y2D8 614 aa16.37■□□□□ 0.21
FDPS-213ENST00000489003 M0QZQ0 153 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 CLASP2O75122 1294 aaKnown RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 ITGB3P05106 788 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 URODP06132 367 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 PAX3P23760 479 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 POLR2BP30876 1174 aaKnown RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 CA8P35219 290 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 NRIP1P48552 1158 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 VAMP7P51809 220 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 DUSP6Q16828 381 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 PRSS55Q6UWB4 352 aaPredicted RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 INTS8Q75QN2 995 aaKnown RBP16.36■□□□□ 0.21
FDPS-213ENST00000489003 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
FDPS-213ENST00000489003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 IKBKBO14920 756 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 KRT19P08727 400 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 CNPP09543 421 aaKnown RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 KRT13P13646 458 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 PTMSP20962 102 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 TAF6P49848 677 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 AP3M2P53677 418 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 ENPEPQ07075 957 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 ADAM15Q13444 863 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 MRPL58Q14197 206 aaKnown RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 CAVIN1Q6NZI2 390 aaKnown RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 DSTYKQ6XUX3 929 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 PPP2R3CQ969Q6 453 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 SENP8Q96LD8 212 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms