RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SMC1AQ14683 1233 aaKnown RBP17.23■□□□□ 0.35
HDAC7-224ENST00000488927 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 KIAA1841Q6NSI8 718 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 TRAPPC11Q7Z392 1133 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 OR5B17Q8NGF7 314 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 MICAL1Q8TDZ2 1067 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 HASPINQ8TF76 798 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 EEF2KMTQ96G04 330 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 BORCS6Q96GS4 357 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 GUCD1Q96NT3 240 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 TCF25Q9BQ70 676 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
HDAC7-224ENST00000488927 ZBP1Q9H171 429 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 ENTPD7Q9NQZ7 604 aa17.23■□□□□ 0.35
HDAC7-224ENST00000488927 PTPRJQ12913 1337 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 F8W810 466 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 FSCN2O14926 492 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 SYN3O14994 580 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 URODP06132 367 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 KRT19P08727 400 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 FOSL2P15408 326 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 IGFBP4P22692 258 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 DNAJB1P25685 340 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 GLUD2P49448 558 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 TAF6P49848 677 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 MARSP56192 900 aaKnown RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 LILRA4P59901 499 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 CREMQ03060 361 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 CAMK1Q14012 370 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 SV2CQ496J9 727 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 FAM114A1Q8IWE2 563 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 C3orf58Q8NDZ4 430 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 SUSD3Q96L08 255 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 POP1Q99575 1024 aaKnown RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
HDAC7-224ENST00000488927 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 MTCH2Q9Y6C9 303 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 TRIP11Q15643 1979 aa17.22■□□□□ 0.35
HDAC7-224ENST00000488927 FSD2A1L4K1 749 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 PHACTR2O75167 634 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 POLR2BP30876 1174 aaKnown RBP17.21■□□□□ 0.35
HDAC7-224ENST00000488927 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC7-224ENST00000488927 DLG4P78352 724 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 DSG1Q02413 1049 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 BIRC3Q13489 604 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 TRPC3Q13507 836 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 ADGRE1Q14246 886 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 FAM171A1Q5VUB5 890 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 CD300LGQ6UXG3 332 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 ENOX1Q8TC92 643 aaKnown RBP17.21■□□□□ 0.35
HDAC7-224ENST00000488927 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 TTPALQ9BTX7 342 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 VN1R3Q9BXE9 311 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 NSUN3Q9H649 340 aaKnown RBP17.21■□□□□ 0.35
HDAC7-224ENST00000488927 TMEM8AQ9HCN3 771 aa17.21■□□□□ 0.35
HDAC7-224ENST00000488927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC7-224ENST00000488927 ANK1P16157 1881 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 SZT2Q5T011 3432 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 SYCE3A1L190 88 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 M0QZQ0 153 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 C4BPAP04003 597 aaKnown RBP17.2■□□□□ 0.34
HDAC7-224ENST00000488927 FGFR3P22607 806 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 ATICP31939 592 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 ERVFC1P60507 584 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 ZACNQ401N2 412 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 DCAF17Q5H9S7 520 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-224ENST00000488927 TCERG1LQ5VWI1 586 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 KRT39Q6A163 491 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 MRPL43Q8N983 215 aaKnown RBP17.2■□□□□ 0.34
HDAC7-224ENST00000488927 CXorf38Q8TB03 319 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 MED15Q96RN5 788 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 SIX4Q9UIU6 781 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 DSEQ9UL01 958 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
HDAC7-224ENST00000488927 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
HDAC7-224ENST00000488927 TRANK1O15050 2925 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 KPNA7A9QM74 516 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 PPEF2O14830 753 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 CXCL14O95715 111 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 STAU1O95793 577 aaKnown RBP17.19■□□□□ 0.34
HDAC7-224ENST00000488927 CAVIN2O95810 425 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms