RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 UBL4BQ8N7F7 174 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 SLC26A7Q8TE54 656 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 DNAJC19Q96DA6 116 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 AK8Q96MA6 479 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 SH3GLB1Q9Y371 365 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 GAS8O95995 478 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 NR1H3Q13133 447 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 NCSTNQ92542 709 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 SLC35B4Q969S0 331 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 PANX3Q96QZ0 392 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 BTNL10A8MVZ5 291 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 TRIM49P0CI25 452 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 TRIM49CP0CI26 452 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 CCDC62Q6P9F0 684 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 KLHL35Q6PF15 583 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 KLHDC10Q6PID8 442 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 DNAJC12Q9UKB3 198 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 RBMX2Q9Y388 322 aaKnown RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 POTECB2RU33 542 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 M0R2N6 131 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 STAMBPO95630 424 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 CALCAP01258 141 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 PLS3P13797 630 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 RRM1P23921 792 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 STAT3P40763 770 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ARFIP2P53365 341 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 RCAN1P53805 252 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 NR1H4Q96RI1 486 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 METTL14Q9HCE5 456 aaKnown RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 KIAA1586Q9HCI6 787 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 SPATA7Q9P0W8 599 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 SLIT2O94813 1529 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ADCY3O60266 1144 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 POLD1P28340 1107 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 GRAMD4Q6IC98 578 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF653Q96CK0 615 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 MIS12Q9H081 205 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ARMC7Q9H6L4 198 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-229ENST00000488765 SAYSD1Q9NPB0 183 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
MCF2L-229ENST00000488765 TMEM221A6NGB7 291 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 PDLIM1O00151 329 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 VILLO15195 856 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 PEX2P28328 305 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 RXRGP48443 463 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 PPP1R2P3Q6NXS1 205 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 C14orf80Q86SX3 495 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 SLC13A5Q86YT5 568 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 OLFM3Q96PB7 478 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 XPOTO43592 962 aaKnown RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 NDUFB5O43674 189 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 CCDC166P0CW27 439 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 NELFEP18615 380 aaKnown RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 PLCB3Q01970 1234 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 ASPHQ12797 758 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 NANOGNBQ7Z5D8 188 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 ANKMY2Q8IV38 441 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 CATSPER2Q96P56 530 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 MAK16Q9BXY0 300 aaKnown RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 IL17RBQ9NRM6 502 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
MCF2L-229ENST00000488765 TJP1Q07157 1748 aa17.1■□□□□ 0.33
MCF2L-229ENST00000488765 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 PABPC4LP0CB38 370 aaKnown RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 COL6A2P12110 1019 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 STT3AP46977 705 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 UBE2SQ16763 222 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SLC45A4Q5BKX6 768 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SYDE2Q5VT97 1194 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RBM15BQ8NDT2 890 aaKnown RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.338e-6■■■■■ 30.1
MCF2L-229ENST00000488765 SLX1AQ9BQ83 275 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 HERPUD2Q9BSE4 406 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms