RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 KCNQ1P51787 676 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 CLUL1Q15846 466 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PSMD5Q16401 504 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PTCRAQ6ISU1 281 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 ANKRD54Q6NXT1 300 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 ANKS3Q6ZW76 656 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 RDH13Q8NBN7 331 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 VN1R2Q8NFZ6 395 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 SUSD3Q96L08 255 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 FBXL18Q96ME1 805 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 DZANK1Q9NVP4 752 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PCDHA5Q9Y5H7 936 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 ANK1P16157 1881 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
CXCL12-207ENST00000488591 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 H7C4K7 107 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 GLUD1P00367 558 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 C1RP00736 705 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 BMP1P13497 986 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-207ENST00000488591 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
CXCL12-207ENST00000488591 CLCN4P51793 760 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 GUCY2FP51841 1108 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
CXCL12-207ENST00000488591 C9orf57Q5W0N0 161 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 DSTYKQ6XUX3 929 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 GUF1Q8N442 669 aaKnown RBP16.29■□□□□ 0.2
CXCL12-207ENST00000488591 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 LNX1Q8TBB1 728 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-207ENST00000488591 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 FNBP1Q96RU3 617 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 KCTD10Q9H3F6 313 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 PCDHB8Q9UN66 801 aa16.29■□□□□ 0.2
CXCL12-207ENST00000488591 GRXCR2A6NFK2 248 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 PIRO00625 290 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 TMEM191BP0C7N4 346 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 EPCAMP16422 314 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 RPL17P18621 184 aaKnown RBP16.28■□□□□ 0.2
CXCL12-207ENST00000488591 LILRA4P59901 499 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 SMAD4Q13485 552 aaKnown RBP16.28■□□□□ 0.2
CXCL12-207ENST00000488591 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-207ENST00000488591 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 PALB2Q86YC2 1186 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 GLYCTKQ8IVS8 523 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 TMEM174Q8WUU8 243 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 ANKRD36BP1Q96IX9 119 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 MAPK8IP1Q9UQF2 711 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
CXCL12-207ENST00000488591 ANO9A1A5B4 782 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 M0QZQ0 153 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 MBTPS2O43462 519 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 TNNC2P02585 160 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 NR3C1P04150 777 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 RPL13P26373 211 aaKnown RBP16.27■□□□□ 0.2
CXCL12-207ENST00000488591 PNPLA4P41247 253 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 CYP24A1Q07973 514 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 DUOXA2Q1HG44 320 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 VARS2Q5ST30 1063 aaKnown RBP16.27■□□□□ 0.2
CXCL12-207ENST00000488591 CES5AQ6NT32 575 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 USP37Q86T82 979 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 CSGALNACT2Q8N6G5 542 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 SPATA20Q8TB22 786 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 HDAC7Q8WUI4 952 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 ZNF560Q96MR9 790 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 CLSTN3Q9BQT9 956 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 MTRRQ9UBK8 725 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 ITGA11Q9UKX5 1188 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 BACE2Q9Y5Z0 518 aa16.27■□□□□ 0.2
CXCL12-207ENST00000488591 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
CXCL12-207ENST00000488591 TNNI1P19237 187 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 OR1D2P34982 312 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 AARSP49588 968 aaKnown RBP eCLIP16.26■□□□□ 0.19
CXCL12-207ENST00000488591 TAF6P49848 677 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 WNT7BP56706 349 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 RBP5P82980 135 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 ITIH3Q06033 890 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 STIM1Q13586 685 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 PSMD6Q15008 389 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 SV2CQ496J9 727 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 SYCE2Q6PIF2 218 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 WDR49Q8IV35 697 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 ADAMTS19Q8TE59 1207 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-207ENST00000488591 CCDC127Q96BQ5 260 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 MFSD14AQ96MC6 490 aa16.26■□□□□ 0.19
CXCL12-207ENST00000488591 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms