RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SMOC2Q9H3U7 446 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 KBTBD4Q9NVX7 518 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 PCDHA7Q9UN72 937 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 SORCS3Q9UPU3 1222 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 PPEF2O14830 753 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 CCL16O15467 120 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 HNRNPA1P09651 372 aaKnown RBP eCLIP19.27■□□□□ 0.68
ITGB1-215ENST00000488494 CYP3A5P20815 502 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 ADSSP30520 456 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
ITGB1-215ENST00000488494 ASIC1P78348 528 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 ROR1Q01973 937 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 SIGLEC14Q08ET2 396 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 ALCAMQ13740 583 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 SLC8B1Q6J4K2 584 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 GET4Q7L5D6 327 aaPredicted RBP19.27■□□□□ 0.68
ITGB1-215ENST00000488494 CD302Q8IX05 232 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 BEST2Q8NFU1 509 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 TRIM9Q9C026 710 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 LRRC27Q9C0I9 530 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 CFAP45Q9UL16 551 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 PCDHB8Q9UN66 801 aa19.27■□□□□ 0.68
ITGB1-215ENST00000488494 H7C4K7 107 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 HOXA9P31269 272 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 ARPP19P56211 112 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 CTXN3Q4LDR2 81 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 SPATA1Q5VX52 437 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 ZNF280DQ6N043 979 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 SYCP3Q8IZU3 236 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 HPS3Q969F9 1004 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 ASIC4Q96FT7 647 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 MYADMQ96S97 322 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 TSPAN18Q96SJ8 248 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 FBXL5Q9UKA1 691 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 POLIQ9UNA4 740 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 DERAQ9Y315 318 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 ANK1P16157 1881 aa19.26■□□□□ 0.67
ITGB1-215ENST00000488494 TSC2P49815 1807 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 WDR27A2RRH5 827 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 POLR2DO15514 142 aaKnown RBP19.25■□□□□ 0.67
ITGB1-215ENST00000488494 TBC1D4O60343 1298 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 XYLBO75191 536 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 AARSP49588 968 aaKnown RBP eCLIP19.25■□□□□ 0.67
ITGB1-215ENST00000488494 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 CRELD2Q6UXH1 353 aaPredicted RBP19.25■□□□□ 0.67
ITGB1-215ENST00000488494 GRASPQ7Z6J2 395 aaPredicted RBP19.25■□□□□ 0.67
ITGB1-215ENST00000488494 UBALD2Q8IYN6 164 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 GLIS3Q8NEA6 775 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 SAAL1Q96ER3 474 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 CHAMP1Q96JM3 812 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 FAM213AQ9BRX8 229 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 ASB7Q9H672 318 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 MAGEF1Q9HAY2 307 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 FAM13BQ9NYF5 915 aa19.25■□□□□ 0.67
ITGB1-215ENST00000488494 M0QZQ0 153 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 PRPF6O94906 941 aaKnown RBP19.24■□□□□ 0.67
ITGB1-215ENST00000488494 FSHRP23945 695 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 NTHL1P78549 312 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 AMPD3Q01432 767 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 MRPL58Q14197 206 aaKnown RBP19.24■□□□□ 0.67
ITGB1-215ENST00000488494 POSTNQ15063 836 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 EFCAB13Q8IY85 973 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 ZSWIM2Q8NEG5 633 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 PBXIP1Q96AQ6 731 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 EPS15L1Q9UBC2 864 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 ZDHHC9Q9Y397 364 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 C2CD2Q9Y426 696 aa19.24■□□□□ 0.67
ITGB1-215ENST00000488494 TIMM13Q9Y5L4 95 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-215ENST00000488494 WDFY4Q6ZS81 3184 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
ITGB1-215ENST00000488494 PRRG1O14668 218 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 POU2F2P09086 479 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 YWHAHQ04917 246 aaPredicted RBP19.23■□□□□ 0.67
ITGB1-215ENST00000488494 C9orf57Q5W0N0 161 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 DSTYKQ6XUX3 929 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 STXBP4Q6ZWJ1 553 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 NOC3LQ8WTT2 800 aaKnown RBP19.23■□□□□ 0.67
ITGB1-215ENST00000488494 MFSD14AQ96MC6 490 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 HCFC1R1Q9NWW0 138 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 RCOR1Q9UKL0 485 aa19.23■□□□□ 0.67
ITGB1-215ENST00000488494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
ITGB1-215ENST00000488494 ABLIM3O94929 683 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 IL18RAPO95256 599 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 CPB1P15086 417 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 GARTP22102 1010 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 CASP1P29466 404 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 WNT7BP56706 349 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 POU5F1Q01860 360 aaKnown RBP19.22■□□□□ 0.67
ITGB1-215ENST00000488494 UVSSAQ2YD98 709 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 FAM26FQ5R3K3 315 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 BMP8AQ7Z5Y6 402 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
ITGB1-215ENST00000488494 C7orf25Q9BPX7 421 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms