RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 KIF4AO95239 1232 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
TM2D1-208ENST00000488206 KRT19P08727 400 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
TM2D1-208ENST00000488206 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PAX3P23760 479 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 BMPR1AP36894 532 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PBX3P40426 434 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PNPLA4P41247 253 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PIK3CAP42336 1068 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 ERVK-21P61565 698 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 TRPC3Q13507 836 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 SV2AQ7L0J3 742 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 TMEM169Q96HH4 297 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 PAAF1Q9BRP4 392 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 TUBGCP2Q9BSJ2 902 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 MARCH5Q9NX47 278 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
TM2D1-208ENST00000488206 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 PIRO00625 290 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 P4HA2O15460 535 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 B3GAT3O94766 335 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 RB1P06400 928 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 FMO5P49326 533 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 TAF6P49848 677 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 CETN1Q12798 172 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 KCNH2Q12809 1159 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 NCOA4Q13772 614 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 KRT31Q15323 416 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 SV2CQ496J9 727 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 EPC2Q52LR7 807 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 CXorf38Q8TB03 319 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 IGSF21Q96ID5 467 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 C17orf80Q9BSJ5 609 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 C11orf84Q9BUA3 381 aaPredicted RBP16.88■□□□□ 0.29
TM2D1-208ENST00000488206 IMPG2Q9BZV3 1241 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
TM2D1-208ENST00000488206 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 NUB1Q9Y5A7 615 aa16.88■□□□□ 0.29
TM2D1-208ENST00000488206 SF3B1O75533 1304 aaKnown RBP eCLIP16.88■□□□□ 0.29
TM2D1-208ENST00000488206 NT5C1B-RDH14C9J2C7 533 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 PPEF2O14830 753 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 PMM2O15305 246 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 TADA2AO75478 443 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CLSTN1O94985 981 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 HLA-DRAP01903 254 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 ATICP31939 592 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 ELAVL2Q12926 359 aaKnown RBP16.87■□□□□ 0.29
TM2D1-208ENST00000488206 MYO1EQ12965 1108 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CBWD6Q4V339 395 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 VWA3BQ502W6 1294 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CBWD3Q5JTY5 395 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CBWD5Q5RIA9 395 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
TM2D1-208ENST00000488206 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CCDC150Q8NCX0 1101 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 FBXO22Q8NEZ5 403 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 TAS1R2Q8TE23 839 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 RABGGTAQ92696 567 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 TAB2Q9NYJ8 693 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 MTUS1Q9ULD2 1270 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 CHD9Q3L8U1 2897 aa16.87■□□□□ 0.29
TM2D1-208ENST00000488206 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 F8W810 466 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 TRAPPC3O43617 180 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 FGF18O76093 207 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 VNN1O95497 513 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 STAU1O95793 577 aaKnown RBP16.86■□□□□ 0.29
TM2D1-208ENST00000488206 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
TM2D1-208ENST00000488206 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
TM2D1-208ENST00000488206 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 KRT17Q04695 432 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 MIIPQ5JXC2 388 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 KLHL23Q8NBE8 558 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 BCL7CQ8WUZ0 217 aaPredicted RBP16.86■□□□□ 0.29
TM2D1-208ENST00000488206 TAF4BQ92750 862 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 HPDLQ96IR7 371 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 COQ4Q9Y3A0 265 aa16.86■□□□□ 0.29
TM2D1-208ENST00000488206 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
TM2D1-208ENST00000488206 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
TM2D1-208ENST00000488206 ITGB1P05556 798 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 LILRA4P59901 499 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 MYL6P60660 151 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 UBE3AQ05086 875 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 SPRED2Q7Z698 418 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 ARNTL2Q8WYA1 636 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms