RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RUFY4Q6ZNE9 571 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 KIAA0319LQ8IZA0 1049 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 RAPGEF5Q92565 580 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 HVCN1Q96D96 273 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 CEP63Q96MT8 703 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 KRT12Q99456 494 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 NOD2Q9HC29 1040 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 BATF3Q9NR55 127 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 GINS2Q9Y248 185 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 A0A087WZ62 844 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 TTLL13PA6NNM8 815 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 CYP2C9P11712 490 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 RPL13P26373 211 aaKnown RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 STRN3Q13033 797 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 NAA25Q14CX7 972 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 MTFR1Q15390 333 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 TRADDQ15628 312 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 UAP1Q16222 522 aaPredicted RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 SLC39A4Q6P5W5 647 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 ZC3H3Q8IXZ2 948 aaKnown RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 VTI1AQ96AJ9 217 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 RSRC1Q96IZ7 334 aaKnown RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 FDXACB1Q9BRP7 624 aaPredicted RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 UNC93B1Q9H1C4 597 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 ISCUQ9H1K1 167 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 EXOC7Q9UPT5 735 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 C17orf102A2RUQ5 167 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 HNRNPDLO14979 420 aaKnown RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ECHS1P30084 290 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ADSSP30520 456 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 CCNHP51946 323 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 PPP2R2AP63151 447 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 NKX3-2P78367 333 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ZNF844Q08AG5 666 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ACCSLQ4AC99 568 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 RNF180Q86T96 592 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 MINDY3Q9H8M7 445 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 GOLGA8IPA6NC78 632 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 GOLGA8JA6NMD2 632 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 BHMG1C9JSJ3 638 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 H0YCG3 227 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 INO80B-WBP1J3KQ70 363 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 EPHB6O15197 1021 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 RAD51CO43502 376 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 DRD4P21917 467 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 NLRP11P59045 1033 aaKnown RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ADAM17P78536 824 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 TFDP1Q14186 410 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 SLC9C1Q4G0N8 1177 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 GKAP1Q5VSY0 366 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 DNAJB3Q8WWF6 145 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 TARS2Q9BW92 718 aaKnown RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 INO80BQ9C086 356 aaPredicted RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 IFT122Q9HBG6 1241 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 DMAC2Q9NW81 257 aa14.67□□□□□ -0.06
COPS7B-221ENST00000488111 CNOT8Q9UFF9 292 aaKnown RBP14.67□□□□□ -0.06
COPS7B-221ENST00000488111 EVPLQ92817 2033 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 MBLAC1A4D2B0 266 aaPredicted RBP14.66□□□□□ -0.06
COPS7B-221ENST00000488111 ASAP2O43150 1006 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 BUB1O43683 1085 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 EXOC3O60645 756 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 LIG4P49917 911 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 KIZQ2M2Z5 673 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 ZBTB8OSQ8IWT0 167 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.66□□□□□ -0.064e-6■□□□□ 9.4
COPS7B-221ENST00000488111 TMEM134Q9H6X4 195 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 HSPBP1Q9NZL4 362 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 SSU72P8A0A1W2PR75 194 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 RPSAP08865 295 aaKnown RBP14.66□□□□□ -0.06
COPS7B-221ENST00000488111 IQCF3P0C7M6 154 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 CST5P28325 142 aaPredicted RBP14.66□□□□□ -0.06
COPS7B-221ENST00000488111 PTENP60484 403 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 TNNC1P63316 161 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 RIPK1Q13546 671 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 CUL1Q13616 776 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 CDCA2Q69YH5 1023 aaPredicted RBP14.66□□□□□ -0.06
COPS7B-221ENST00000488111 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 PCSK9Q8NBP7 692 aaKnown RBP14.66□□□□□ -0.06
COPS7B-221ENST00000488111 POMGNT1Q8WZA1 660 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 SAAL1Q96ER3 474 aa14.66□□□□□ -0.06
COPS7B-221ENST00000488111 LRRC53A6NM62 1247 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 MSCO60682 206 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 GSTA1P08263 222 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 GPC3P51654 580 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 ACLYP53396 1101 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 MAPK6Q16659 721 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 GDF6Q6KF10 455 aaPredicted RBP14.65□□□□□ -0.06
COPS7B-221ENST00000488111 CDR2LQ86X02 465 aaPredicted RBP14.65□□□□□ -0.06
COPS7B-221ENST00000488111 OR2W6PQ8NHA6 318 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 BAP1Q92560 729 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 CCDC113Q9H0I3 377 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.06
COPS7B-221ENST00000488111 GTF2IRD1Q9UHL9 959 aa14.65□□□□□ -0.06
COPS7B-221ENST00000488111 B4GALT5O43286 388 aa14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms