RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TDP1Q9NUW8 608 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 POLHQ9Y253 713 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 MAP3K2Q9Y2U5 619 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 PIPSLA2A3N6 862 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 SLC16A6O15403 523 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 PRC1O43663 620 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 SGTAO43765 313 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 PLIN1O60240 522 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 TMEM127O75204 238 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 IL2RBP14784 551 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 DDX6P26196 483 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 ADSLP30566 484 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 BMPR1AP36894 532 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 GZMKP49863 264 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 ODF1Q14990 250 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 UBE3CQ15386 1083 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 ARHGAP29Q52LW3 1261 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 GADL1Q6ZQY3 521 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 USP45Q70EL2 814 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 DOK3Q7L591 496 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 DRC7Q8IY82 874 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 OR7D4Q8NG98 312 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 COA7Q96BR5 231 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 DMRT3Q9NQL9 472 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 C1orf112Q9NSG2 853 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 MOCS1Q9NZB8 636 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 GPRC5DQ9NZD1 345 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 TUBD1Q9UJT1 453 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 TLK1Q9UKI8 766 aa4.79□□□□□ -1.64
HMGB1P36-201ENST00000487709 CCDC154A6NI56 674 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 AP1G1O43747 822 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 CAND2O75155 1236 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 ITGA10O75578 1167 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 ZRANB2O95218 330 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 KRT18P05783 430 aaKnown RBP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 PDCP20941 246 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 PTPN7P35236 360 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 CDC42EP1Q00587 391 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 CREMQ03060 361 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 RAB39AQ14964 217 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 LRRC41Q15345 812 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 PDCD4Q53EL6 469 aaKnown RBP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 CCSAPQ6IQ19 270 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 SYT12Q8IV01 421 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 TPH2Q8IWU9 490 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 RAVER1Q8IY67 606 aaKnown RBP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 GRAMD1CQ8IYS0 662 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 PQLC1Q8N2U9 271 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 OR10H5Q8NGA6 315 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 MVB12AQ96EY5 273 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 ADAM2Q99965 735 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 SCOCQ9UIL1 159 aa4.78□□□□□ -1.64
HMGB1P36-201ENST00000487709 VSTM5A8MXK1 200 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 HTRA2O43464 458 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 GPR32O75388 356 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 SPDEFO95238 335 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 POU2F2P09086 479 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 ITGAMP11215 1152 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 MPP3Q13368 585 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 ABHD17BQ5VST6 288 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 CATIPQ7Z7H3 387 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 DENND1CQ8IV53 801 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 MSL3Q8N5Y2 521 aaKnown RBP4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 CAGE1Q8TC20 777 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 TTC17Q96AE7 1141 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 RGMAQ96B86 450 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 FAM167AQ96KS9 214 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 KIAA1586Q9HCI6 787 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 GNL3LQ9NVN8 582 aaKnown RBP4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 CLCA2Q9UQC9 943 aa4.77□□□□□ -1.65
HMGB1P36-201ENST00000487709 CTNND1O60716 968 aaKnown RBP4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 ESRRBO95718 433 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 SPATA31D3P0C874 917 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 SMARCA1P28370 1054 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 SLC4A10Q6U841 1118 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 ABHD15Q6UXT9 468 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 SPATA31D4Q6ZUB0 917 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 GPRIN1Q7Z2K8 1008 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 ARHGEF25Q86VW2 580 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 RNF169Q8NCN4 708 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 ZNF384Q8TF68 577 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 CASKIN2Q8WXE0 1202 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 DPF2Q92785 391 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 HPS3Q969F9 1004 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 DUSP26Q9BV47 211 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 CNNM1Q9NRU3 951 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 RNF181Q9P0P0 153 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 POGKQ9P215 609 aa4.76□□□□□ -1.65
HMGB1P36-201ENST00000487709 B5MCH6 92 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 DIRC3C9JPN6 131 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 FAM227AF5H4B4 570 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 IGLV2-14P01704 120 aa4.75□□□□□ -1.65
HMGB1P36-201ENST00000487709 FTLP02792 175 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms