RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PRKCSHP14314 528 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 PNPLA4P41247 253 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 GUCY2FP51841 1108 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 LILRA4P59901 499 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 ELAVL2Q12926 359 aaKnown RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 GPM6BQ13491 265 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 NCAPHQ15003 741 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 IQCB1Q15051 598 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 ZNF697Q5TEC3 545 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 CDKAL1Q5VV42 579 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 CD300LGQ6UXG3 332 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 SPRED2Q7Z698 418 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 RABGGTAQ92696 567 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 SLC35C1Q96A29 364 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 TTYH1Q9H313 450 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 CERS4Q9HA82 394 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 TMEM8AQ9HCN3 771 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 SAMSN1Q9NSI8 373 aaKnown RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 FANCLQ9NW38 375 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 MARCH5Q9NX47 278 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 SIX4Q9UIU6 781 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 AGAP1Q9UPQ3 857 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 VWA8A3KMH1 1905 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 POLR2BP30876 1174 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 ATICP31939 592 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TRPC3Q13507 836 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TCP11X2Q5H9J9 407 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 DCAF17Q5H9S7 520 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TDRD10Q5VZ19 366 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 KRT39Q6A163 491 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TMEM173Q86WV6 379 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 CREBRFQ8IUR6 639 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 RNF168Q8IYW5 571 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 AOPEPQ8N6M6 819 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 C3orf58Q8NDZ4 430 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 BCL7CQ8WUZ0 217 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 ZNF560Q96MR9 790 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 LMAN2LQ9H0V9 348 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 TSPY26PQ9H489 355 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 ALG13Q9NP73 1137 aaKnown RBP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
COL4A6-207ENST00000487645 SF3B1O75533 1304 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL4A6-207ENST00000487645 LRRC10BA6NIK2 292 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 BECN2A8MW95 431 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 KCNJ18B7U540 433 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 F8W810 466 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 P4HA2O15460 535 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 N4BP1O75113 896 aaKnown RBP14.34□□□□□ -0.11
COL4A6-207ENST00000487645 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
COL4A6-207ENST00000487645 KRT19P08727 400 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 GCLMP48507 274 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A6-207ENST00000487645 TAF6P49848 677 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 MYO1EQ12965 1108 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 BIRC3Q13489 604 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 NCOA4Q13772 614 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 KCNJ12Q14500 433 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
COL4A6-207ENST00000487645 SGSM1Q2NKQ1 1148 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 SV2CQ496J9 727 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 FUT10Q6P4F1 479 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 TAF4BQ92750 862 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 HPDLQ96IR7 371 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 SUSD3Q96L08 255 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 TUBGCP2Q9BSJ2 902 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 GPR62Q9BZJ7 368 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 CBX8Q9HC52 389 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 GDAP2Q9NXN4 497 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 LMCD1Q9NZU5 365 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 COQ4Q9Y3A0 265 aa14.34□□□□□ -0.11
COL4A6-207ENST00000487645 ATG2AQ2TAZ0 1938 aa14.33□□□□□ -0.11
COL4A6-207ENST00000487645 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 EPOPA6NHQ4 379 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 M0QZQ0 153 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 PPEF2O14830 753 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 GRM6O15303 877 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 VNN1O95497 513 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 AFPP02771 609 aaKnown RBP14.33□□□□□ -0.12
COL4A6-207ENST00000487645 SOD2P04179 222 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 ZNF18P17022 549 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 IGFBP6P24592 240 aaPredicted RBP14.33□□□□□ -0.12
COL4A6-207ENST00000487645 FMO5P49326 533 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms