RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MAP4K3Q8IVH8 894 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 C3orf58Q8NDZ4 430 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 ZSWIM2Q8NEG5 633 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 SNIP1Q8TAD8 396 aaKnown RBP7.82□□□□□ -1.16
UBE4B-209ENST00000487244 KCNN1Q92952 543 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 PPP2R3CQ969Q6 453 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 SPATA32Q96LK8 384 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 UHRF1Q96T88 793 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-209ENST00000487244 HERC2P3Q9BVR0 1158 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 CCDC94Q9BW85 323 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-209ENST00000487244 STRA6Q9BX79 667 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 TRIM9Q9C026 710 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 CD320Q9NPF0 282 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 TOR4AQ9NXH8 423 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 TUBGCP4Q9UGJ1 667 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 CD207Q9UJ71 328 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 ADAM28Q9UKQ2 775 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 CFAP45Q9UL16 551 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 HCFC2Q9Y5Z7 792 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 TSC2P49815 1807 aa7.82□□□□□ -1.16
UBE4B-209ENST00000487244 A0A0B4J269 797 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 A0A1B0GVL5 298 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 H0YCG3 227 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 I3L4J1 428 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 MBTPS2O43462 519 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 NCK2O43639 380 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 AP1G2O75843 785 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GCNT3O95395 438 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 SOD2P04179 222 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 CNPP09543 421 aaKnown RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 PFKFB1P16118 471 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GAP43P17677 238 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 RPL17P18621 184 aaKnown RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 ADSSP30520 456 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GLUD2P49448 558 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 CLCNKBP51801 687 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GUCY2FP51841 1108 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 SH3BP2P78314 561 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 KRT85P78386 507 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 ENOX2Q16206 610 aaKnown RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 HERC4Q5GLZ8 1057 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 RTP2Q5QGT7 225 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 PRSS55Q6UWB4 352 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 APBB1IPQ7Z5R6 666 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 IQUBQ8NA54 791 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 SMRP1Q8NCR6 262 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 ARMC2Q8NEN0 867 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 SLC22A17Q8WUG5 538 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 ACAP3Q96P50 834 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 CDCA3Q99618 268 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 MSTO1Q9BUK6 570 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 COLEC11Q9BWP8 271 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 BLZF1Q9H2G9 400 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 TNMDQ9H2S6 317 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 GOLPH3LQ9H4A5 285 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 ST6GALNAC4Q9H4F1 302 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 MRPL44Q9H9J2 332 aaKnown RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 OLFML3Q9NRN5 406 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 TOPORSQ9NS56 1045 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-209ENST00000487244 PANK4Q9NVE7 773 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 CNTN3Q9P232 1028 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 KCNH3Q9ULD8 1083 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 IRAK3Q9Y616 596 aa7.81□□□□□ -1.16
UBE4B-209ENST00000487244 SF3B1O75533 1304 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 TTC26A0AVF1 554 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 LACTBL1A8MY62 500 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 OGTO15294 1046 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 TEX28O15482 410 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 TADA2AO75478 443 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 B3GAT3O94766 335 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 PRPF6O94906 941 aaKnown RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 URODP06132 367 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 NFICP08651 508 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 CLTAP09496 248 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 WEE2P0C1S8 567 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 KCNE1P15382 129 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 HOXD13P35453 343 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 AFMP43652 599 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 BRCC3P46736 316 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 ACOT2P49753 483 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 ASIC1P78348 528 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 DSG1Q02413 1049 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 SMAD4Q13485 552 aaKnown RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 CUL4BQ13620 913 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 UPP1Q16831 310 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 L1TD1Q5T7N2 865 aaKnown RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 ANKRD54Q6NXT1 300 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 TMEM184AQ6ZMB5 413 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 C12orf76Q8N812 135 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 ZNF511Q8NB15 262 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 RIN2Q8WYP3 895 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 HVCN1Q96D96 273 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 FAM84AQ96KN4 292 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 KLHL5Q96PQ7 755 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms