RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TAF6P49848 677 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CTC1Q2NKJ3 1217 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 ZCWPW2Q504Y3 356 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 KIAA0319Q5VV43 1072 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CGRRF1Q99675 332 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CLDND1Q9NY35 253 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 CACNG4Q9UBN1 327 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 PCDHB8Q9UN66 801 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 F8W810 466 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 C2CD2LO14523 706 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 CETN3O15182 167 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 DLATP10515 647 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 HOXB8P17481 243 aaPredicted RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 TNNI1P19237 187 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 KLRC2P26717 231 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 PSMC2P35998 433 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 PRCPP42785 496 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 RBP5P82980 135 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MYO1EQ12965 1108 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MYO9BQ13459 2157 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MORC3Q14149 939 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 PSMD5Q16401 504 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 PRRC2BQ5JSZ5 2229 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 DSTYKQ6XUX3 929 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 TMEM184AQ6ZMB5 413 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 EP400NLQ6ZTU2 488 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 ADGRD2Q7Z7M1 963 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 RBM23Q86U06 439 aaKnown RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
LIMS3-205ENST00000487150 C3orf58Q8NDZ4 430 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MFSD14AQ96MC6 490 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 MTMR12Q9C0I1 747 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 IGFLR1Q9H665 355 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 DACH1Q9UI36 760 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 BACE2Q9Y5Z0 518 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 TRANK1O15050 2925 aa15.81■□□□□ 0.12
LIMS3-205ENST00000487150 SPDYE4A6NLX3 237 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 M0QZQ0 153 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 PIRO00625 290 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
LIMS3-205ENST00000487150 LILRB3O75022 631 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 GLUD1P00367 558 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
LIMS3-205ENST00000487150 TYMPP19971 482 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 YWHAHQ04917 246 aaPredicted RBP15.8■□□□□ 0.12
LIMS3-205ENST00000487150 ADAM9Q13443 819 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 ADAM15Q13444 863 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 CAMK4Q16566 473 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIMS3-205ENST00000487150 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 RDH13Q8NBN7 331 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 SPATA18Q8TC71 538 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 HDAC7Q8WUI4 952 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 CCDC127Q96BQ5 260 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 KLHL5Q96PQ7 755 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 MTRRQ9UBK8 725 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 PCDHGC5Q9Y5F6 944 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 HCFC2Q9Y5Z7 792 aa15.8■□□□□ 0.12
LIMS3-205ENST00000487150 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
LIMS3-205ENST00000487150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.79■□□□□ 0.12
LIMS3-205ENST00000487150 IKBKBO14920 756 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 PER2O15055 1255 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 TEX28O15482 410 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 STX10O60499 249 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 CLASP2O75122 1294 aaKnown RBP15.79■□□□□ 0.12
LIMS3-205ENST00000487150 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
LIMS3-205ENST00000487150 ITGB3P05106 788 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 KRT19P08727 400 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 KCNA5P22460 613 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 CCNE1P24864 410 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
LIMS3-205ENST00000487150 POLR2BP30876 1174 aaKnown RBP15.79■□□□□ 0.12
LIMS3-205ENST00000487150 BRCC3P46736 316 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 LILRA4P59901 499 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 PAK1Q13153 545 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 LEXMQ3ZCV2 418 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 RTP2Q5QGT7 225 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 RTL10Q7L3V2 364 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 CSGALNACT2Q8N6G5 542 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 C1orf127Q8N9H9 656 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 MLKLQ8NB16 471 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 ZSWIM2Q8NEG5 633 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
LIMS3-205ENST00000487150 ERCC4Q92889 916 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms