RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 RCN1Q15293 331 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 MAPK6Q16659 721 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 KCNT1Q5JUK3 1230 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 MFSD5Q6N075 450 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 PHC3Q8NDX5 983 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 NAP1L4Q99733 375 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC77Q9BR77 488 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 SLC17A7Q9P2U7 560 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 GTF3C4Q9UKN8 822 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 ZHX2Q9Y6X8 837 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 TPBGLP0DKB5 382 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ACOT2P49753 483 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 POLGP54098 1239 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 TTC17Q96AE7 1141 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ZNF395Q9H8N7 513 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SGK1O00141 431 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 TNNI1P19237 187 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ADSSP30520 456 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 MFAP3P55082 362 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ALCAMQ13740 583 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 KPNB1Q14974 876 aaKnown RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SLC7A6OSQ96CW6 309 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 LRRC19Q9H756 370 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 APBA3O96018 575 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 HSPA6P17066 643 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ITGB5P18084 799 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CALB2P22676 271 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 BLMHQ13867 455 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CLPTM1LQ96KA5 538 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC134Q9H6E4 229 aa13.12□□□□□ -0.31
HSPG2-211ENST00000486901 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
HSPG2-211ENST00000486901 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 MAPK13O15264 365 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 FDX1P10109 184 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ATP5DP30049 168 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TFDP1Q14186 410 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TMEM270Q6UE05 265 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 HIPK4Q8NE63 616 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 MIPEPQ99797 713 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TXLNGQ9NUQ3 528 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 WASF2Q9Y6W5 498 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 F5H423 210 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 FSCN2O14926 492 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 BAG2O95816 211 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ALADP13716 330 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 STAT2P52630 851 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 CDR2Q01850 454 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SPP2Q13103 211 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TMEM130Q8N3G9 435 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC33Q8N5R6 958 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 STK32AQ8WU08 396 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 WHRNQ9P202 907 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 NFIBO00712 420 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ADRA2BP18089 450 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms