RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF185O15231 689 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 HTRA2O43464 458 aaPredicted RBP5.8□□□□□ -1.48
SMC4-218ENST00000486711 AKR1B10O60218 316 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 WASP42768 502 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 FLT3LGP49771 235 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 FAM102AQ5T9C2 384 aaPredicted RBP5.8□□□□□ -1.48
SMC4-218ENST00000486711 ABHD17BQ5VST6 288 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 ARMC6Q6NXE6 501 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 B3GNT9Q6UX72 402 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 GPR156Q8NFN8 814 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 RIN2Q8WYP3 895 aaPredicted RBP5.8□□□□□ -1.48
SMC4-218ENST00000486711 TTC17Q96AE7 1141 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 RUNDC1Q96C34 613 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 CEP95Q96GE4 821 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 BBC3Q96PG8 261 aaPredicted RBP5.8□□□□□ -1.48
SMC4-218ENST00000486711 C7orf25Q9BPX7 421 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 TEX101Q9BY14 249 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 FAM204AQ9H8W3 233 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 ARNT2Q9HBZ2 717 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 DMRT3Q9NQL9 472 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 MAN1C1Q9NR34 630 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 SLC52A1Q9NWF4 448 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 SCOCQ9UIL1 159 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 FPGT-TNNI3KV9GXZ4 949 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 UNC119BA6NIH7 251 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 PJA2O43164 708 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 ENDOD1O94919 500 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 MGAT2Q10469 447 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 ERCC6LQ2NKX8 1250 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 MAP9Q49MG5 647 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 PRAMEF14Q5SWL7 426 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 KMT5AQ9NQR1 393 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 LIMCH1Q9UPQ0 1083 aa5.79□□□□□ -1.48
SMC4-218ENST00000486711 USP15Q9Y4E8 981 aaPredicted RBP5.79□□□□□ -1.48
SMC4-218ENST00000486711 CFAP20Q9Y6A4 193 aaKnown RBP5.79□□□□□ -1.48
SMC4-218ENST00000486711 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
SMC4-218ENST00000486711 MARCH11A6NNE9 402 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 MASP2O00187 686 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
SMC4-218ENST00000486711 TYRP1P17643 537 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 CD38P28907 300 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 ECHS1P30084 290 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 SEC24CP53992 1094 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 PER3P56645 1201 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 TP53BP2Q13625 1128 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 GRM3Q14832 879 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 CCDC157Q569K6 752 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 MFSD14BQ5SR56 506 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 THEMIS2Q5TEJ8 643 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 DENND1CQ8IV53 801 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 PRR18Q8N4B5 295 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 DPF2Q92785 391 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 TIFAQ96CG3 184 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 ACO2Q99798 780 aaKnown RBP5.78□□□□□ -1.48
SMC4-218ENST00000486711 ADAM2Q99965 735 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 MANSC1Q9H8J5 431 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 IPPQ9Y573 584 aa5.78□□□□□ -1.48
SMC4-218ENST00000486711 SNRPA1P09661 255 aaKnown RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 EDNRBP24530 442 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 ADSLP30566 484 aaPredicted RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 CLK3P49761 638 aaKnown RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 CLRN1P58418 232 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 C21orf58P58505 322 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 PPP3CAQ08209 521 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 RESTQ13127 1097 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 MST1LQ2TV78 715 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 C3orf36Q3SXR2 165 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 FAM47AQ5JRC9 791 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 ATXN7L2Q5T6C5 722 aaPredicted RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 METRNLQ641Q3 311 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 SRGAP1Q7Z6B7 1085 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 TTC7BQ86TV6 843 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 RHOT1Q8IXI2 618 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 DRC7Q8IY82 874 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 UHRF1Q96T88 793 aaPredicted RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 RNF181Q9P0P0 153 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 DDX20Q9UHI6 824 aaKnown RBP5.77□□□□□ -1.49
SMC4-218ENST00000486711 ATP11BQ9Y2G3 1177 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 MAP3K2Q9Y2U5 619 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 INSL6Q9Y581 213 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 COX11Q9Y6N1 276 aa5.77□□□□□ -1.49
SMC4-218ENST00000486711 ARID4BQ4LE39 1312 aaPredicted RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 DRGXA6NNA5 263 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 H3BML4 177 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 PEX14O75381 377 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 CDKL5O76039 1030 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 SPDEFO95238 335 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 CFIP05156 583 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 TRIM27P14373 513 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 PTPN7P35236 360 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 IL12RB1P42701 662 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 CHN2P52757 468 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 FOXI1Q12951 378 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 OS9Q13438 667 aaPredicted RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 IL10RAQ13651 578 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 UBE4AQ14139 1066 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 BRD3Q15059 726 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 PRR16Q569H4 304 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms