RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PCDHB8Q9UN66 801 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 EXOC7Q9UPT5 735 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 PCDHB13Q9Y5F0 798 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 MYH11P35749 1972 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 TISP43B9A030 160 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 M0QZQ0 153 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 CCL16O15467 120 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 ACOT2P49753 483 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 ROR1Q01973 937 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 CTXN3Q4LDR2 81 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 L1TD1Q5T7N2 865 aaKnown RBP20■□□□□ 0.79
PRPF40A-209ENST00000486100 TMEM130Q8N3G9 435 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 BEST2Q8NFU1 509 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 ACCSQ96QU6 501 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 LRRC27Q9C0I9 530 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 SMOC2Q9H3U7 446 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 PANK4Q9NVE7 773 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 FBXL5Q9UKA1 691 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 DERAQ9Y315 318 aa20■□□□□ 0.79
PRPF40A-209ENST00000486100 GCNT3O95395 438 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 LAMP2P13473 410 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ATF2P15336 505 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 FSHRP23945 695 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ADSSP30520 456 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ELF1P32519 619 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 AARSP49588 968 aaKnown RBP eCLIP19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 KCNA1Q09470 495 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 E2F4Q16254 413 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ATL3Q6DD88 541 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 JADE1Q6IE81 842 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ZNF280DQ6N043 979 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 POMGNT1Q8WZA1 660 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 NXPE3Q969Y0 559 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 TNMDQ9H2S6 317 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 IKZF4Q9H2S9 585 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 CUEDC2Q9H467 287 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 KBTBD4Q9NVX7 518 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 POLIQ9UNA4 740 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 ZFP37Q9Y6Q3 630 aaPredicted RBP19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 TRIP11Q15643 1979 aa19.99■□□□□ 0.79
PRPF40A-209ENST00000486100 WDR27A2RRH5 827 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 PAX3P23760 479 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 GUCY2FP51841 1108 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 ARPP19P56211 112 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 NTHL1P78549 312 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 ALCAMQ13740 583 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 TPGS2Q68CL5 300 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 SHC4Q6S5L8 630 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 CRELD2Q6UXH1 353 aaPredicted RBP19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 GET4Q7L5D6 327 aaPredicted RBP19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 CCDC65Q8IXS2 484 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 IQUBQ8NA54 791 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 KCNG4Q8TDN1 519 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 VWA8A3KMH1 1905 aa19.98■□□□□ 0.79
PRPF40A-209ENST00000486100 ARHGEF37A1IGU5 675 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 OAZ2O95190 189 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 NFICP08651 508 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 CASP5P51878 434 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 AMPD3Q01432 767 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 PKP1Q13835 747 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 TMEM132DQ14C87 1099 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 DSTYKQ6XUX3 929 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 TCEAL8Q8IYN2 117 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 RSAD2Q8WXG1 361 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 OXCT2Q9BYC2 517 aaPredicted RBP19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 DNMT3BQ9UBC3 853 aaKnown RBP19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 CFAP45Q9UL16 551 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 MAFFQ9ULX9 164 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 DUSP12Q9UNI6 340 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 C2CD2Q9Y426 696 aa19.97■□□□□ 0.79
PRPF40A-209ENST00000486100 DENND4AQ7Z401 1863 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 MTCL1Q9Y4B5 1905 aaKnown RBP19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 PIRO00625 290 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 PDGFBP01127 241 aaPredicted RBP19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 AVPR2P30518 371 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 LILRA4P59901 499 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 YWHAHQ04917 246 aaPredicted RBP19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 C9orf57Q5W0N0 161 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 SYCP3Q8IZU3 236 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 SLC44A3Q8N4M1 653 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 DHX58Q96C10 678 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 FGFBP2Q9BYJ0 223 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 TRIM9Q9C026 710 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 TMEM206Q9H813 350 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 CYP4F11Q9HBI6 524 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 AFF4Q9UHB7 1163 aaKnown RBP19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 CDH7Q9ULB5 785 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 PCDHA7Q9UN72 937 aa19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 TIMM13Q9Y5L4 95 aaPredicted RBP19.96■□□□□ 0.79
PRPF40A-209ENST00000486100 C2orf16Q68DN1 1984 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 CITO14578 2027 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 ANO9A1A5B4 782 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 ANHXE9PGG2 379 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 PRRG1O14668 218 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 PPEF2O14830 753 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 SEC24AO95486 1093 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 LDHAP00338 332 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms