RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 STMN1P16949 149 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 TNFRSF1AP19438 455 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 L1CAMP32004 1257 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 SEPHS1P49903 392 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PRR5P85299 388 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 AKAP17AQ02040 695 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ADCY1Q08828 1119 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 MTMR1Q13613 665 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PLEKHO1Q53GL0 409 aaPredicted RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 RRP12Q5JTH9 1297 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 CFAP58Q5T655 872 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 INTS11Q5TA45 600 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 NT5DC1Q5TFE4 455 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 TRIM68Q6AZZ1 485 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ZC3H14Q6PJT7 736 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 CYP2R1Q6VVX0 501 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 LDHAL6AQ6ZMR3 332 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 FASTKD5Q7L8L6 764 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 IQCA1Q86XH1 822 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ARHGEF39Q8N4T4 335 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 C7orf31Q8N865 590 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 C19orf47Q8N9M1 422 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ZSWIM2Q8NEG5 633 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PARD3BQ8TEW8 1205 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 RSAD2Q8WXG1 361 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 RBM15Q96T37 977 aaKnown RBP eCLIP4.43□□□□□ -1.72e-9■■■□□ 17.2
PRPF38B-205ENST00000485810 FUCA2Q9BTY2 467 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 VPS33BQ9H267 617 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 IL25Q9H293 177 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ALG13Q9NP73 1137 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PDLIM7Q9NR12 457 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ATP8A2Q9NTI2 1148 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ANKEF1Q9NU02 776 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 EXOC1Q9NV70 894 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 IRAK4Q9NWZ3 460 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 HYPKQ9NX55 129 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PPARGC1AQ9UBK2 798 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 DKK3Q9UBP4 350 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 GULP1Q9UBP9 304 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 DBF4Q9UBU7 674 aaPredicted RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 ZMAT5Q9UDW3 170 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 FBXL5Q9UKA1 691 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 BLOC1S6Q9UL45 172 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 AGTPBP1Q9UPW5 1226 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 AKT3Q9Y243 479 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 PCDHGB3Q9Y5G1 929 aa4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 CHD2O14647 1828 aaKnown RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 FRMPD2Q68DX3 1309 aaPredicted RBP4.43□□□□□ -1.7
PRPF38B-205ENST00000485810 A0A1B0GVC2 190 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SH3D21A4FU49 640 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 PI4KAP2A4QPH2 592 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 KLHL33A6NCF5 533 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 C2orf81A6NN90 581 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 BOLA2-SMG1P6H3BVE0 249 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 K7ESM1 405 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RTCAO00442 366 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SRGAP3O43295 1099 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 STX6O43752 255 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SGTAO43765 313 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 NOBOXO60393 691 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ABLIM3O94929 683 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 CCDC172P0C7W6 258 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 VCAM1P19320 739 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SYT1P21579 422 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 HOXD10P28358 340 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 GALNSP34059 522 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MC3RP41968 323 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MAGEA10P43363 369 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 CLNS1AP54105 237 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 AMPD2Q01433 879 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 LRRC74AQ0VAA2 488 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ZBTB17Q13105 803 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 TRIM14Q14142 442 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 NR1I3Q14994 352 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ARHGAP29Q52LW3 1261 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 HECTD3Q5T447 861 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RNF219Q5W0B1 726 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 EEF1DP3Q658K8 133 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 CCBE1Q6UXH8 406 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 USP51Q70EK9 711 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RUFY3Q7L099 469 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RNF180Q86T96 592 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 NLRP14Q86W24 1093 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RNF168Q8IYW5 571 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 AFAP1L2Q8N4X5 818 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 FAM26EQ8N5C1 309 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 CELF2-AS1Q8N7Q2 184 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 PI4KAP1Q8N8J0 262 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 TRIML1Q8N9V2 468 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 LINS1Q8NG48 757 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MAP4K1Q92918 833 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ARHGEF2Q92974 986 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RILPL2Q969X0 211 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 JAKMIP2Q96AA8 810 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms