RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 AMY2AP04746 511 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 GSTM1P09488 218 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 AKR1B1P15121 316 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 AMY2BP19961 511 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 CD9P21926 228 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 FNTBP49356 437 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 KIF11P52732 1056 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 RRP1P56182 461 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 JAM2P57087 298 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 MRPS9P82933 396 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 DUSP4Q13115 394 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SPARCL1Q14515 664 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 ZNF267Q14586 743 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 EPHA7Q15375 998 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 PPP1R7Q15435 360 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 NR0B2Q15466 257 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SLC14A2Q15849 920 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 C5orf22Q49AR2 442 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 FIGNQ5HY92 759 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 RALGPS1Q5JS13 557 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 GPATCH4Q5T3I0 446 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 GPR139Q6DWJ6 353 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 DARS2Q6PI48 645 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 RNF111Q6ZNA4 994 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 ARHGAP36Q6ZRI8 547 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 USP45Q70EL2 814 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 RALYLQ86SE5 291 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 SLC9B2Q86UD5 537 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 DENND1CQ8IV53 801 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 NOSTRINQ8IVI9 506 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 CCDC65Q8IXS2 484 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 KRT78Q8N1N4 520 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 USHBP1Q8N6Y0 703 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 DEPTORQ8TB45 409 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 UTP15Q8TED0 518 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 USP13Q92995 863 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 ATP2A3Q93084 1043 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 NACC2Q96BF6 587 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 MVB12AQ96EY5 273 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 LTV1Q96GA3 475 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 NAF1Q96HR8 494 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 RAX2Q96IS3 184 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 MAML3Q96JK9 1138 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SGCZQ96LD1 299 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 UBXN10Q96LJ8 280 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 ZSCAN31Q96LW9 406 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 DESI2Q9BSY9 194 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 TAOK3Q9H2K8 898 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SP110Q9HB58 689 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 TRPV5Q9NQA5 729 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 TCP11L1Q9NUJ3 509 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SEPT11Q9NVA2 429 aaKnown RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 CLDND1Q9NY35 253 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 CEP72Q9P209 647 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 IFT80Q9P2H3 777 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 ZNF624Q9P2J8 865 aaPredicted RBP4.96□□□□□ -1.62
RTN4-213ENST00000485749 LAMP5Q9UJQ1 280 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 ZNF112Q9UJU3 913 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 MTUS1Q9ULD2 1270 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 GPR34Q9UPC5 381 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 TMEM98Q9Y2Y6 226 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 KIF21BO75037 1637 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 SOGA1O94964 1423 aa4.96□□□□□ -1.62
RTN4-213ENST00000485749 ATAD2BQ9ULI0 1458 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 C7orf72A4D263 438 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 HNRNPCL2B2RXH8 293 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 H7C0S8 307 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 SPTLC2O15270 562 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 NPHS1O60500 1241 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 HNRNPCL1O60812 293 aaKnown RBP4.95□□□□□ -1.62
RTN4-213ENST00000485749 DTNBO60941 627 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 MAFO75444 373 aaPredicted RBP4.95□□□□□ -1.62
RTN4-213ENST00000485749 KRT37O76014 449 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 APBB3O95704 486 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 ESR1P03372 595 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 GNAT1P11488 350 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 PDCP20941 246 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 C5AR1P21730 350 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 LTKP29376 864 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 BCL6P41182 706 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 HNF4AP41235 474 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CD86P42081 329 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 SLC5A3P53794 718 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CACNB3P54284 484 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 INHBEP58166 350 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TNFAIP2Q03169 654 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 NSUN2Q08J23 767 aaKnown RBP eCLIP4.95□□□□□ -1.62
RTN4-213ENST00000485749 CDC16Q13042 620 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TUBB8Q3ZCM7 444 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 DGKKQ5KSL6 1271 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TATDN1Q6P1N9 297 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 ARHGEF18Q6ZSZ5 1173 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CCDC80Q76M96 950 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 OVCH2Q7RTZ1 564 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CCDC186Q7Z3E2 898 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 KCNK18Q7Z418 384 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TSPYL5Q86VY4 417 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms