RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ASPAP45381 313 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 RAD9BQ6WBX8 426 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 OLIG1Q8TAK6 271 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.1
LRIF1-202ENST00000485275 BAG1Q99933 345 aaPredicted RBP15.64■□□□□ 0.1
LRIF1-202ENST00000485275 STK33Q9BYT3 514 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 C1orf112Q9NSG2 853 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 ARHGAP20Q9P2F6 1191 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 ITGA11Q9UKX5 1188 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 POLIQ9UNA4 740 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 ANO9A1A5B4 782 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 FOXN3O00409 490 aaPredicted RBP15.64■□□□□ 0.09
LRIF1-202ENST00000485275 SKILP12757 684 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 CSF2RAP15509 400 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 RFX1P22670 979 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 GCNT1Q02742 428 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF699Q32M78 642 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
LRIF1-202ENST00000485275 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 SHC3Q92529 594 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 APBB2Q92870 758 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 SPAG5Q96R06 1193 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 ACP6Q9NPH0 428 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 UBQLN1Q9UMX0 589 aaKnown RBP15.64■□□□□ 0.09
LRIF1-202ENST00000485275 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
LRIF1-202ENST00000485275 OFD1O75665 1012 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 ACO1P21399 889 aaKnown RBP15.63■□□□□ 0.09
LRIF1-202ENST00000485275 GATMP50440 423 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 ARID5AQ03989 594 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 TRPC3Q13507 836 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 CUL2Q13617 745 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 IRF2BP2Q7Z5L9 587 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 HACE1Q8IYU2 909 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 UBR7Q8N806 425 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 ZNF397Q8NF99 534 aaPredicted RBP15.63■□□□□ 0.09
LRIF1-202ENST00000485275 PAAF1Q9BRP4 392 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 SDCBP2Q9H190 292 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 AIPL1Q9NZN9 384 aa15.63■□□□□ 0.09
LRIF1-202ENST00000485275 PIRO00625 290 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SPTLC1O15269 473 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 INPPL1O15357 1258 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 GFPT2O94808 682 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 PARNO95453 639 aaKnown RBP15.62■□□□□ 0.09
LRIF1-202ENST00000485275 POMCP01189 267 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SOX5P35711 763 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SGSM1Q2NKQ1 1148 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SFMBT2Q5VUG0 894 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SCARA5Q6ZMJ2 495 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.62■□□□□ 0.092e-7■■□□□ 13.9
LRIF1-202ENST00000485275 C17orf53Q8N3J3 647 aaPredicted RBP15.62■□□□□ 0.09
LRIF1-202ENST00000485275 BEST2Q8NFU1 509 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 NIF3L1Q9GZT8 377 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 VRTNQ9H8Y1 702 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 MYO6Q9UM54 1294 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 INPP5FQ9Y2H2 1132 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 ZKSCAN5Q9Y2L8 839 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 FNDC1Q4ZHG4 1894 aaPredicted RBP15.62■□□□□ 0.09
LRIF1-202ENST00000485275 EVI5O60447 810 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 EOMESO95936 686 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 CALCAP01258 141 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SKIP12755 728 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 RAG1P15918 1043 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 RAP1GAPP47736 663 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 WDR44Q5JSH3 913 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 C3orf58Q8NDZ4 430 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 RABGGTAQ92696 567 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SYN2Q92777 582 aaPredicted RBP15.62■□□□□ 0.09
LRIF1-202ENST00000485275 PGBD4Q96DM1 585 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 HPDLQ96IR7 371 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 RPS6KC1Q96S38 1066 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 SMYD3Q9H7B4 428 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 TMEM161AQ9NX61 479 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 DAAM1Q9Y4D1 1078 aa15.62■□□□□ 0.09
LRIF1-202ENST00000485275 TSC2P49815 1807 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 THP07101 528 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 CYP3A5P20815 502 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 LRPAP1P30533 357 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 RBP5P82980 135 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 WDR72Q3MJ13 1102 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 CNKSR3Q6P9H4 555 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 TOGARAM2Q6ZUX3 1019 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 FAM71AQ8IYT1 594 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 CCDC112Q8NEF3 446 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 SYT11Q9BT88 431 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 BCO2Q9BYV7 579 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 IMPG2Q9BZV3 1241 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 HCSTQ9UBK5 93 aa15.61■□□□□ 0.09
LRIF1-202ENST00000485275 NXF1Q9UBU9 619 aaKnown RBP15.61■□□□□ 0.09
LRIF1-202ENST00000485275 CASTOR2A6NHX0 329 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 F8W810 466 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 CLSTN1O94985 981 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 STAU1O95793 577 aaKnown RBP15.6■□□□□ 0.09
LRIF1-202ENST00000485275 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 ACRP10323 421 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 RFC2P35250 354 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 CLCN1P35523 988 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 PRKCIP41743 596 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 STAT1P42224 750 aa15.6■□□□□ 0.09
LRIF1-202ENST00000485275 CLCNKBP51801 687 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms