RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 UBR7Q8N806 425 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 ACAP3Q96P50 834 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 ARGLU1Q9NWB6 273 aaPredicted RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 PDCD11Q14690 1871 aaKnown RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 NPTXRO95502 500 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 GRM5P41594 1212 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 PAFAH1B1P43034 410 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 PTPROQ16827 1216 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 ACAD10Q6JQN1 1059 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 NOTUMQ6P988 496 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 SLC27A1Q6PCB7 646 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 ZNF572Q7Z3I7 529 aaPredicted RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 C1orf127Q8N9H9 656 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 CALR3Q96L12 384 aaKnown RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 MTG1Q9BT17 334 aaPredicted RBP17.89■□□□□ 0.45
CTSA-207ENST00000484855 XYLT2Q9H1B5 865 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 PDCL3Q9H2J4 239 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 SPC25Q9HBM1 224 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 COG5Q9UP83 839 aa17.89■□□□□ 0.45
CTSA-207ENST00000484855 HOXA11P31270 313 aaPredicted RBP17.88■□□□□ 0.45
CTSA-207ENST00000484855 HOXC8P31273 242 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 HADHBP55084 474 aaKnown RBP17.88■□□□□ 0.45
CTSA-207ENST00000484855 TRIM32Q13049 653 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 TMEM132DQ14C87 1099 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 TCEAL1Q15170 157 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 DEFB115Q30KQ5 88 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 SCARA5Q6ZMJ2 495 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 ZNF653Q96CK0 615 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 ANKZF1Q9H8Y5 726 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 SIX4Q9UIU6 781 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 CENPFP49454 3210 aa17.88■□□□□ 0.45
CTSA-207ENST00000484855 SEPT4O43236 478 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 ATMINO43313 823 aaPredicted RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 RHOXF2BP0C7M4 288 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 RARBP10826 455 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 CD58P19256 250 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 EIF4BP23588 611 aaKnown RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 ZNF132P52740 706 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 SP3Q02447 781 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 C2orf54Q08AI8 447 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 NT5DC3Q86UY8 548 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 RHOXF2Q9BQY4 288 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 PARD6BQ9BYG5 372 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 UPF3AQ9H1J1 476 aaKnown RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 EHD2Q9NZN4 543 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 RNF14Q9UBS8 474 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 GTF3C4Q9UKN8 822 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 AMFRQ9UKV5 643 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 KCNK3O14649 394 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 PGK1P00558 417 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 ITGB3P05106 788 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 UNGP13051 313 aaPredicted RBP17.87■□□□□ 0.45
CTSA-207ENST00000484855 ASPAP45381 313 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 SNX17Q15036 470 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 MSANTD4Q8NCY6 345 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 CISHQ9NSE2 258 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 SMARCAL1Q9NZC9 954 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
CTSA-207ENST00000484855 CES2O00748 559 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 THAP12O43422 761 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 YWHAEP62258 255 aaKnown RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 CAP1Q01518 475 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 CACNB2Q08289 660 aaPredicted RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 TRIM72Q6ZMU5 477 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 MS4A14Q96JA4 679 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 NXF1Q9UBU9 619 aaKnown RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 C2CD2Q9Y426 696 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 CYP1A1P04798 512 aaPredicted RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 CYP1A2P05177 515 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 AXLP30530 894 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 CLCN6P51797 869 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 ITIH3Q06033 890 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 NT5DC4Q86YG4 428 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 CD302Q8IX05 232 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 TMEM130Q8N3G9 435 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 NME8Q8N427 588 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 TMEM40Q8WWA1 233 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 PBKQ96KB5 322 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 EIF2AQ9BY44 585 aaKnown RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
CTSA-207ENST00000484855 POLIQ9UNA4 740 aa17.86■□□□□ 0.45
CTSA-207ENST00000484855 MTA2O94776 668 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 WEE2P0C1S8 567 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 NSFP46459 744 aaKnown RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 CENPCQ03188 943 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 NAA35Q5VZE5 725 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 C11orf63Q6NUN7 778 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 TAF2Q6P1X5 1199 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 SPATA4Q8NEY3 305 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 ZNF564Q8TBZ8 553 aaPredicted RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 CPA5Q8WXQ8 436 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 KIF12Q96FN5 646 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 HES6Q96HZ4 224 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms