RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 TSC22D3Q99576 134 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 SH2D3AQ9BRG2 576 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 KANSL3Q9P2N6 904 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 SIPA1L1O43166 1804 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 LRRD1A4D1F6 860 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 SIGLEC16A6NMB1 481 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 PTPN4P29074 926 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 CCNG2Q16589 344 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 AP1ARQ63HQ0 302 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 SLC30A9Q6PML9 568 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 C12orf56Q8IXR9 622 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 CPA5Q8WXQ8 436 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 ACCSQ96QU6 501 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 UBN1Q9NPG3 1134 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 TOPORSQ9NS56 1045 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 NMRK1Q9NWW6 199 aa20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 CCNL1Q9UK58 526 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-216ENST00000484134 SMIM24O75264 130 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 NPTXRO95502 500 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 CA4P22748 312 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 DSTYKQ6XUX3 929 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 SH3BP5LQ7L8J4 393 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 NLRP9Q7RTR0 991 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 MCOLN2Q8IZK6 566 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 CERKQ8TCT0 537 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ZNF333Q96JL9 665 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 LBHD1Q9BQE6 289 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 FHDC1Q9C0D6 1143 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 TMEM206Q9H813 350 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ASB3Q9Y575 518 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ANKRD33BA6NCL7 494 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ZSCAN5DPP0CG00 497 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 KRT15P19012 456 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 SESN3P58005 492 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 TAS2R40P59535 323 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 KLC1Q07866 573 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 LBRQ14739 615 aaKnown RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 B3GNT9Q6UX72 402 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 C4orf50Q6ZRC1 276 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 RBBP8NLQ8NC74 664 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 PHC3Q8NDX5 983 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 TAS1R2Q8TE23 839 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 TEKT4Q8WW24 435 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 NRG4Q8WWG1 115 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ZNF75CPQ92670 426 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 GMCL1Q96IK5 515 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 FAM84AQ96KN4 292 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ZNF577Q9BSK1 485 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 CADM1Q9BY67 442 aaKnown RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 DCLRE1BQ9H816 532 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 NPHS2Q9NP85 383 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 PAPOLBQ9NRJ5 636 aaKnown RBP20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 ZFP69BQ9UJL9 534 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 PRR12Q9ULL5 1215 aa20.94■□□□□ 0.94
RPUSD3-216ENST00000484134 DDX39AO00148 427 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 PMM2O15305 246 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 TYROBPO43914 113 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SNUPNO95149 360 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 NEFHP12036 1026 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 UNGP13051 313 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 PECAM1P16284 738 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SP100P23497 879 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 MARK3P27448 753 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SLC18A1P54219 525 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 MAPK6Q16659 721 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 FAM98CQ17RN3 349 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SGSM1Q2NKQ1 1148 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 CEP55Q53EZ4 464 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SLC45A4Q5BKX6 768 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 APBB1IPQ7Z5R6 666 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 TMEM174Q8WUU8 243 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 CFAP57Q96MR6 1250 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 MAK16Q9BXY0 300 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 ABLIM1O14639 778 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 RFC5P40937 340 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 RASSF2P50749 326 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 PAPOLAP51003 745 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 NR1H3Q13133 447 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 CLNKQ7Z7G1 428 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 TDRPQ86YL5 185 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 BBOF1Q8ND07 529 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 GMCL1P1Q8NEA9 526 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SH3TC2Q8TF17 1288 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SMC6Q96SB8 1091 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 DLGAP2Q9P1A6 1054 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 LARSQ9P2J5 1176 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SUGT1Q9Y2Z0 365 aa20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.93■□□□□ 0.94
RPUSD3-216ENST00000484134 BBOX1O75936 387 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 ETS1P14921 441 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 MUM1Q2TAK8 710 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 TRAPPC3LQ5T215 181 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 RNF220Q5VTB9 566 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 GSTA5Q7RTV2 222 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 OSBPL8Q9BZF1 889 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 LNPEPQ9UIQ6 1025 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 SMG5Q9UPR3 1016 aaKnown RBP20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 UMODL1Q5DID0 1318 aa20.92■□□□□ 0.94
RPUSD3-216ENST00000484134 C2CD2LO14523 706 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms