RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PSTPIP2Q9H939 334 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ABCB10Q9NRK6 738 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 PCDHA4Q9UN74 947 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ITM2BQ9Y287 266 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 A0A087WXM4 84 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 PSMB9P28065 219 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF200P98182 395 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 LPIN1Q14693 890 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 DNAJC12Q9UKB3 198 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 MYO3BQ8WXR4 1341 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 OPLAHO14841 1288 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 CDO1Q16878 200 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ATL2Q8NHH9 583 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 CDHR1Q96JP9 859 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 SUGT1Q9Y2Z0 365 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 GNB5O14775 395 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 AKR1B1P15121 316 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ZSWIM7Q19AV6 140 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 DDAH1O94760 285 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ALOX5P09917 674 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 XRCC4Q13426 336 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 EIF4A2Q14240 407 aaKnown RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 RAD9BQ6WBX8 426 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 SUCLG2Q96I99 432 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 C8orf4Q9NR00 106 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 WASLO00401 505 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 CALB1P05937 261 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 RAG1P15918 1043 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 POLR2EP19388 210 aaKnown RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF589Q86UQ0 364 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 POC5Q8NA72 575 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 LRRN4CLQ8ND94 238 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 NEU2Q9Y3R4 380 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 MYH7P12883 1935 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 F5H423 210 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ROR1Q01973 937 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 MARCH10Q8NA82 808 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 LRRC20Q8TCA0 184 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-207ENST00000483888 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
COL12A1-207ENST00000483888 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ENO2P09104 434 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 OLR1P78380 273 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 UXS1Q8NBZ7 420 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 FNIP1Q8TF40 1166 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 SENP7Q9BQF6 1050 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 POLR1BQ9H9Y6 1135 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 KRT84Q9NSB2 600 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TTLL12Q14166 644 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 RNF220Q5VTB9 566 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 RFFLQ8WZ73 363 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 CHMP1AQ9HD42 196 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF224Q9NZL3 707 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 AIPL1Q9NZN9 384 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 DMTF1Q9Y222 760 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 DPPA5A6NC42 116 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 SYNDIG1LA6NDD5 238 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TALDO1P37837 337 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 CCR3P51677 355 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 POLD3Q15054 466 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ZFP69Q49AA0 526 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 C9orf72Q96LT7 481 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TBATAQ96M53 351 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 FNDC3AQ9Y2H6 1198 aaKnown RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 BRDTQ58F21 947 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 C3orf62Q6ZUJ4 267 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 LRRC8DQ7L1W4 858 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 NUP160Q12769 1436 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TNKSO95271 1327 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 FRMPD2Q68DX3 1309 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 A0A1W2PQ72 361 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 MSL3P1P0C860 447 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 CENPPQ6IPU0 288 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 CAVIN3Q969G5 261 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 DDX50Q9BQ39 737 aaKnown RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 MKNK1Q9BUB5 465 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 TMEM120AQ9BXJ8 343 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 FAM32AQ9Y421 112 aaKnown RBP10.72□□□□□ -0.69
COL12A1-207ENST00000483888 NOS1P29475 1434 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 AXIN1O15169 862 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 PEX1O43933 1283 aa10.72□□□□□ -0.69
COL12A1-207ENST00000483888 CFBP00751 764 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms