RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MCL1Q07820 350 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PRPF4BQ13523 1007 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 RAPGEF1Q13905 1077 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CAPSQ13938 189 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 DRAP1Q14919 205 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TCEAL1Q15170 157 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF569Q5MCW4 686 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PRAMEF19Q5SWL8 479 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 IQCEQ6IPM2 695 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 EFCAB12Q6NXP0 572 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CRELD2Q6UXH1 353 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TRMT1LQ7Z2T5 733 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 MTERF4Q7Z6M4 381 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 KIAA1328Q86T90 577 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CBWD2Q8IUF1 395 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 FAM71AQ8IYT1 594 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 RDH13Q8NBN7 331 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ACRBPQ8NEB7 543 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TRIM58Q8NG06 486 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PLEKHO2Q8TD55 490 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 LMBR1Q8WVP7 490 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PABPC5Q96DU9 382 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 SLC9A7Q96T83 725 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 NAPGQ99747 312 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ACO2Q99798 780 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 LACRTQ9GZZ8 138 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 RNPEPQ9H4A4 650 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TUT1Q9H6E5 874 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 SUGCTQ9HAC7 445 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 PTPRHQ9HD43 1115 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 RAB20Q9NX57 234 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 SUCLA2Q9P2R7 463 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ADAMTS1Q9UHI8 967 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 CDC23Q9UJX2 597 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 MTUS1Q9ULD2 1270 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 NENFQ9UMX5 172 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 GUCA1BQ9UMX6 200 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.47
COL17A1-206ENST00000483876 TNFSF13BQ9Y275 285 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 JRKLQ9Y4A0 524 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 FHOD1Q9Y613 1164 aa5.84□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF236Q9UL36 1845 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 NRCAMQ92823 1304 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 A0A087X0T9 212 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 A0A0A6YYK5 440 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 DCDC2BA2VCK2 349 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 LRRIQ3A6PVS8 624 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TISP43B9A030 160 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SORBS3O60504 671 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TACC1O75410 805 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 URI1O94763 535 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 C4BPAP04003 597 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TUBBP07437 444 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ADRB2P07550 413 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 FAM228BP0C875 321 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM49P0CI25 452 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM49CP0CI26 452 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF865P0CJ78 1059 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 GZMAP12544 262 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 CDK7P50613 346 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 BPIFB4P59827 614 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 NKX3-2P78367 333 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TNFAIP2Q03169 654 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 GFPT1Q06210 699 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 WHAMMP3Q1A5X7 153 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ZACNQ401N2 412 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TDRD12Q587J7 1177 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ALKBH5Q6P6C2 394 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 MTHFD1LQ6UB35 978 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 PRR23BQ6ZRT6 265 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SV2AQ7L0J3 742 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF571Q7Z3V5 609 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SRGAP1Q7Z6B7 1085 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF410Q86VK4 478 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 NME8Q8N427 588 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 CEP112Q8N8E3 955 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TMEM105Q8N8V8 129 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 RNF149Q8NC42 400 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 PHOSPHO2Q8TCD6 241 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 AFG1LQ8WV93 481 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SHC3Q92529 594 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TAF4BQ92750 862 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 COPS5Q92905 334 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SECISBP2LQ93073 1101 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 CCDC127Q96BQ5 260 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 BICD1Q96G01 975 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 RPGRIP1Q96KN7 1286 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 RIPOR3Q96MK2 946 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 NOX5Q96PH1 765 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 ALS2CR12Q96Q35 445 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 FNBP1Q96RU3 617 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 FAM213AQ9BRX8 229 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 TSEN34Q9BSV6 310 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 SYT11Q9BT88 431 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 MSTO1Q9BUK6 570 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 KIFC3Q9BVG8 833 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms