RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PIK3R5Q8WYR1 880 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 CGNQ9P2M7 1197 aaKnown RBP28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 MTCL1Q9Y4B5 1905 aaKnown RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 TRAPPC3O43617 180 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 PSMD5Q16401 504 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 TJAP1Q5JTD0 557 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 C9orf57Q5W0N0 161 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 XXYLT1Q8NBI6 393 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 SPATA20Q8TB22 786 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 SMARCE1Q969G3 411 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 DPP3Q9NY33 737 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 TSC2P49815 1807 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 CLCN4P51793 760 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 TFAMQ00059 246 aaKnown RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 SNRNP35Q16560 246 aaKnown RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 LMBRD2Q68DH5 695 aaPredicted RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 GPR65Q8IYL9 337 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 GOLGA5Q8TBA6 731 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 SUSD3Q96L08 255 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 KIAA1586Q9HCI6 787 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 CD207Q9UJ71 328 aa28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 HOOK1Q9UJC3 728 aaKnown RBP28.69■■■□□ 2.18
GTF3C4-202ENST00000483873 PTPRJQ12913 1337 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 ANO9A1A5B4 782 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 PDXKO00764 312 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 SMC2O95347 1197 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 ADH1AP07327 375 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 BMP1P13497 986 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 ANKRD54Q6NXT1 300 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 NT5DC4Q86YG4 428 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 ELOA2Q8IYF1 753 aaPredicted RBP28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 GUF1Q8N442 669 aaKnown RBP28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 CASP10Q92851 521 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 GSDMAQ96QA5 445 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 APOL5Q9BWW9 433 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 LMBRD1Q9NUN5 540 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 RMND1Q9NWS8 449 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 FNIP2Q9P278 1114 aa28.68■■■□□ 2.18
GTF3C4-202ENST00000483873 PIRO00625 290 aa28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 ADAM12O43184 909 aa28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 SCARA3Q6AZY7 606 aa28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 PTCRAQ6ISU1 281 aaPredicted RBP28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 PPFIBP1Q86W92 1011 aa28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 CLSTN3Q9BQT9 956 aa28.67■■■□□ 2.18
GTF3C4-202ENST00000483873 SPTLC1O15269 473 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 EXOC3O60645 756 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 SRGAP2BP0DMP2 458 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 IL9P15248 144 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 AARSP49588 968 aaKnown RBP eCLIP28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 SYCE2Q6PIF2 218 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 PALB2Q86YC2 1186 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 SMRP1Q8NCR6 262 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 DMAC2Q9NW81 257 aa28.66■■■□□ 2.18
GTF3C4-202ENST00000483873 GRXCR2A6NFK2 248 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 MBTPS2O43462 519 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 KIF20AO95235 890 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 NR3C1P04150 777 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 CYP24A1Q07973 514 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 VARS2Q5ST30 1063 aaKnown RBP28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 ZNF658Q5TYW1 1059 aaPredicted RBP28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 ISM2Q6H9L7 571 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 RSPO2Q6UXX9 243 aaPredicted RBP28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 C1orf127Q8N9H9 656 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 OR5B17Q8NGF7 314 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 MTMR12Q9C0I1 747 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 MTRRQ9UBK8 725 aa28.65■■■□□ 2.18
GTF3C4-202ENST00000483873 SYN3O14994 580 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 LILRA4P59901 499 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 CREMQ03060 361 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 SMAD4Q13485 552 aaKnown RBP28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 SLC9A9Q8IVB4 645 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 C12orf76Q8N812 135 aaPredicted RBP28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 FEZF2Q8TBJ5 459 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 MAN1B1Q9UKM7 699 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 PCDHB8Q9UN66 801 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 TRAF3IP3Q9Y228 551 aa28.64■■■□□ 2.18
GTF3C4-202ENST00000483873 C2orf16Q68DN1 1984 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 M0QZQ0 153 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 CALUO43852 315 aaPredicted RBP28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 GLUD1P00367 558 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 ITGB3P05106 788 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 SPATA31D3P0C874 917 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 POLR2BP30876 1174 aaKnown RBP28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 PRCPP42785 496 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 CASP4P49662 377 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 PDXDC1Q6P996 788 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 SPATA31D4Q6ZUB0 917 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 CACTINQ8WUQ7 758 aaKnown RBP28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 CCDC127Q96BQ5 260 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 GZF1Q9H116 711 aaPredicted RBP28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 INTS13Q9NVM9 706 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 CDH22Q9UJ99 828 aa28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 TIMM13Q9Y5L4 95 aaPredicted RBP28.63■■■□□ 2.17
GTF3C4-202ENST00000483873 GOLGA6L22H0YM25 854 aa28.62■■■□□ 2.17
GTF3C4-202ENST00000483873 TGM5O43548 720 aa28.62■■■□□ 2.17
GTF3C4-202ENST00000483873 TMEM191BP0C7N4 346 aa28.62■■■□□ 2.17
GTF3C4-202ENST00000483873 DLATP10515 647 aaKnown RBP28.62■■■□□ 2.17
GTF3C4-202ENST00000483873 PSMD6Q15008 389 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms