RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SH2B1Q9NRF2 756 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 HEPACAM2A8MVW5 462 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 C1QTNF9BB2RNN3 333 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 TRAPPC3O43617 180 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 KCNK5O95279 499 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 BAG4O95429 457 aaKnown RBP11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 C1QTNF9P0C862 333 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 LRRC32Q14392 662 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 TEAD2Q15562 447 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 CYP4A22Q5TCH4 519 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 STPG1Q5TH74 334 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 TTC8Q8TAM2 541 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 SHKBP1Q8TBC3 707 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 FBXL5Q9UKA1 691 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 PCDHA12Q9UN75 941 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 DSPP15924 2871 aaKnown RBP11.97□□□□□ -0.49
SMARCC1-205ENST00000483847 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 SMIM28A0A1B0GU29 152 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 ACKR2O00590 384 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 WNT7AO00755 349 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 ZNF806P0C7X5 589 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 PXNP49023 591 aaPredicted RBP11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 KPNA1P52294 538 aaPredicted RBP11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 EPHA5P54756 1037 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 MLLT6P55198 1093 aaPredicted RBP11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 TWF1Q12792 350 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 MAPK6Q16659 721 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 PKN3Q6P5Z2 889 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 KBTBD6Q86V97 674 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 WDR5BQ86VZ2 330 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 CEP120Q8N960 986 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 CSGALNACT1Q8TDX6 532 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 UROC1Q96N76 676 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 LRRC3BQ96PB8 259 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 NAP1L4Q99733 375 aaKnown RBP11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 ADPGKQ9BRR6 497 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 KIFC3Q9BVG8 833 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 TTC12Q9H892 705 aaPredicted RBP11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 POLD4Q9HCU8 107 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 SPAG17Q6Q759 2223 aa11.96□□□□□ -0.49
SMARCC1-205ENST00000483847 KIF26AQ9ULI4 1882 aaPredicted RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 MYBPHLA2RUH7 354 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 SPECC1L-ADORA2AF8WAN1 911 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 EXTL3O43909 919 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 EPN2O95208 641 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 HOXA6P31267 233 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 CTHP32929 405 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 TXKP42681 527 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 FCHO2Q0JRZ9 810 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 NR5A1Q13285 461 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 CCINQ13939 588 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 MRPL58Q14197 206 aaKnown RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 PON2Q15165 354 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 STXBP5Q5T5C0 1151 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 NT5DC1Q5TFE4 455 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 YAF2Q8IY57 180 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ELMOD1Q8N336 334 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ZFYVE19Q96K21 471 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 LSM14BQ9BX40 385 aaKnown RBP11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 C2orf40Q9H1Z8 148 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 SLITRK6Q9H5Y7 841 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 ASAH2Q9NR71 780 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 GTSE1Q9NYZ3 720 aa11.95□□□□□ -0.5
SMARCC1-205ENST00000483847 WDFY3Q8IZQ1 3526 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 EML5Q05BV3 1969 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 A0A1W2PRU2 124 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 PODXLO00592 558 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 CHADO15335 359 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 VNN2O95498 520 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 XRCC6P12956 609 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 PSMA5P28066 241 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 RAP1GAPP47736 663 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 OSTNP61366 133 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 CALCRLQ16602 461 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 CTXN3Q4LDR2 81 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 PLA2G2CQ5R387 149 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 TPGS2Q68CL5 300 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 TCEAL6Q6IPX3 200 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 PSAPL1Q6NUJ1 521 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 UNQ6494/PRO21346Q6UXR6 183 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 RNF19BQ6ZMZ0 732 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 DEPTORQ8TB45 409 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 GAB3Q8WWW8 586 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 TNFRSF25Q93038 417 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms