RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 TRPC3Q13507 836 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 C9orf57Q5W0N0 161 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 COLGALT2Q8IYK4 626 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 LRRC52Q8N7C0 313 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 FAM84AQ96KN4 292 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 VRTNQ9H8Y1 702 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 SIK3Q9Y2K2 1263 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 DDHD2O94830 711 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 PON1P27169 355 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 GATMP50440 423 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 HERC6Q8IVU3 1022 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 SEMA4DQ92854 862 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 FAXDC2Q96IV6 333 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 FAM193BQ96PV7 902 aaPredicted RBP22.32■■□□□ 1.16
RXRB-204ENST00000483281 PLCB1Q9NQ66 1216 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 INSL6Q9Y581 213 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 CEP290O15078 2479 aa22.32■■□□□ 1.16
RXRB-204ENST00000483281 ATP2A2P16615 1042 aaKnown RBP22.31■■□□□ 1.16
RXRB-204ENST00000483281 RNASELQ05823 741 aaKnown RBP22.31■■□□□ 1.16
RXRB-204ENST00000483281 SHHQ15465 462 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 ZNF280BQ86YH2 543 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 LRRC43Q8N309 656 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 RAD9AQ99638 391 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 TMEM175Q9BSA9 504 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 NRDE2Q9H7Z3 1164 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 AGAP1Q9UPQ3 857 aa22.31■■□□□ 1.16
RXRB-204ENST00000483281 CARNS1A5YM72 827 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
RXRB-204ENST00000483281 PNPLA4P41247 253 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 GUCY2FP51841 1108 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 SYCP1Q15431 976 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 UPP1Q16831 310 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 C9orf50Q5SZB4 431 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 DPY19L2P1Q6NXN4 242 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 CRACR2AQ9BSW2 395 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 UBE2OQ9C0C9 1292 aaKnown RBP22.3■■□□□ 1.16
RXRB-204ENST00000483281 XYLT2Q9H1B5 865 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 GCNT4Q9P109 453 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 SCN1AP35498 2009 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 SLC9A1P19634 815 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 POLR2BP30876 1174 aaKnown RBP22.3■■□□□ 1.16
RXRB-204ENST00000483281 PIK3CAP42336 1068 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 DCLRE1AQ6PJP8 1040 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 INTS2Q9H0H0 1204 aaKnown RBP22.3■■□□□ 1.16
RXRB-204ENST00000483281 GOLGA2P5Q9HBQ8 144 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 DAAM1Q9Y4D1 1078 aa22.3■■□□□ 1.16
RXRB-204ENST00000483281 ADCY5O95622 1261 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 ALDH2P05091 517 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 KRT19P08727 400 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 MYL6P60660 151 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 WDR44Q5JSH3 913 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 SCARA3Q6AZY7 606 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 SMYD5Q6GMV2 418 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 TRIM65Q6PJ69 517 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 TMCO2Q7Z6W1 182 aaPredicted RBP22.29■■□□□ 1.16
RXRB-204ENST00000483281 CCDC150Q8NCX0 1101 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 IMPG2Q9BZV3 1241 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 CWH43Q9H720 699 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 ITIH6Q6UXX5 1313 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 TNRC18O15417 2968 aaPredicted RBP22.29■■□□□ 1.16
RXRB-204ENST00000483281 CDC25BP30305 580 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 CLCNKBP51801 687 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 MYO1EQ12965 1108 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 FAM117BQ6P1L5 589 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 VSTM4Q8IW00 320 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 SP7Q8TDD2 431 aaPredicted RBP22.29■■□□□ 1.16
RXRB-204ENST00000483281 HPDLQ96IR7 371 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 FAM81BQ96LP2 452 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 RNPC3Q96LT9 517 aaKnown RBP22.29■■□□□ 1.16
RXRB-204ENST00000483281 YME1L1Q96TA2 773 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 ZBED2Q9BTP6 218 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 FBXL5Q9UKA1 691 aa22.29■■□□□ 1.16
RXRB-204ENST00000483281 TMEM189-UBE2V1I3L0A0 370 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 PODXLO00592 558 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 BTG3Q14201 252 aaPredicted RBP22.28■■□□□ 1.16
RXRB-204ENST00000483281 IQCDQ96DY2 449 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 ZNF560Q96MR9 790 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 NUP58Q9BVL2 599 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 SIX2Q9NPC8 291 aa22.28■■□□□ 1.16
RXRB-204ENST00000483281 B4GALT3O60512 393 aa22.27■■□□□ 1.16
RXRB-204ENST00000483281 LRRN2O75325 713 aa22.27■■□□□ 1.16
RXRB-204ENST00000483281 FIGNQ5HY92 759 aa22.27■■□□□ 1.16
RXRB-204ENST00000483281 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.27■■□□□ 1.16
RXRB-204ENST00000483281 TMEM130Q8N3G9 435 aa22.27■■□□□ 1.16
RXRB-204ENST00000483281 CASTOR2A6NHX0 329 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 TAF6P49848 677 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 LILRA4P59901 499 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 PAN2Q504Q3 1202 aaKnown RBP22.27■■□□□ 1.15
RXRB-204ENST00000483281 KLHDC7AQ5VTJ3 777 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 SPECC1LQ69YQ0 1117 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 NT5C1BQ96P26 610 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 EDEM3Q9BZQ6 932 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 GDAP2Q9NXN4 497 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 APEX2Q9UBZ4 518 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 DNAJB4Q9UDY4 337 aa22.27■■□□□ 1.15
RXRB-204ENST00000483281 PPEF2O14830 753 aa22.26■■□□□ 1.15
RXRB-204ENST00000483281 GALTP07902 379 aa22.26■■□□□ 1.15
RXRB-204ENST00000483281 MLLT1Q03111 559 aaPredicted RBP22.26■■□□□ 1.15
RXRB-204ENST00000483281 ZNF699Q32M78 642 aa22.26■■□□□ 1.15
RXRB-204ENST00000483281 SV2CQ496J9 727 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms