RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ITGB1P05556 798 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 PRKCSHP14314 528 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 POLR2BP30876 1174 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 C1orf220Q5T0J3 134 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 TRAPPC11Q7Z392 1133 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 SLC39A11Q8N1S5 342 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 KLHL23Q8NBE8 558 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 FBXO22Q8NEZ5 403 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 BCL7CQ8WUZ0 217 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 DDX27Q96GQ7 796 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 TMEM169Q96HH4 297 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 ZNF576Q9H609 170 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 SPG21Q9NZD8 308 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 LIMA1Q9UHB6 759 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 AP5Z1O43299 807 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 TADA2AO75478 443 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 FGF18O76093 207 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 IGFBP6P24592 240 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 LRPAP1P30533 357 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 RPL9P32969 192 aaKnown RBP21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 PPM1AP35813 382 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 PPP3CAQ08209 521 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 TDRD10Q5VZ19 366 aaKnown RBP21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 C9orf57Q5W0N0 161 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 SCARA3Q6AZY7 606 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 C3orf58Q8NDZ4 430 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 IGSF21Q96ID5 467 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 SAMD11Q96NU1 681 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 MARCH5Q9NX47 278 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 ITGA11Q9UKX5 1188 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 AGAP1Q9UPQ3 857 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 NUB1Q9Y5A7 615 aa21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC12-220ENST00000482645 MARSP56192 900 aaKnown RBP21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 CLDN10P78369 228 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 DCLRE1AQ6PJP8 1040 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 TRIM59Q8IWR1 403 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 SLC35C1Q96A29 364 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 FAM161BQ96MY7 647 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 TUBGCP2Q9BSJ2 902 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 PLVAPQ9BX97 442 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 ALG13Q9NP73 1137 aaKnown RBP21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 IFNKQ9P0W0 207 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 ADAM28Q9UKQ2 775 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 MYO9BQ13459 2157 aa21.48■■□□□ 1.03
TRAPPC12-220ENST00000482645 PES1O00541 588 aaKnown RBP21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 STX10O60499 249 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 TPM2P07951 284 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 COPB1P53618 953 aaKnown RBP21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 AP3M2P53677 418 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 TRPC3Q13507 836 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 SARM1Q6SZW1 724 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 SV2AQ7L0J3 742 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 GDPD5Q8WTR4 605 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 TRIM5Q9C035 493 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 VPS16Q9H269 839 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 SIX4Q9UIU6 781 aa21.47■■□□□ 1.03
TRAPPC12-220ENST00000482645 EPOPA6NHQ4 379 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 I3L4J1 428 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 C4BPAP04003 597 aaKnown RBP21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 SCN1AP35498 2009 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 MXI1P50539 228 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 RBP5P82980 135 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 KRT17Q04695 432 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 ENPEPQ07075 957 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 MAN2A1Q16706 1144 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 ZNF697Q5TEC3 545 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 APTXQ7Z2E3 356 aaKnown RBP21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 TTYH1Q9H313 450 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 TMEM8AQ9HCN3 771 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.035e-8■■■■■ 198.7
TRAPPC12-220ENST00000482645 PLXNA4Q9HCM2 1894 aa21.46■■□□□ 1.03
TRAPPC12-220ENST00000482645 ANO9A1A5B4 782 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 CARNS1A5YM72 827 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 C5orf67F2Z3F1 127 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 RFXAPO00287 272 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 PIRO00625 290 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 CST3P01034 146 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 RB1P06400 928 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 PIK3CAP42336 1068 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 BRCC3P46736 316 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 KCNH2Q12809 1159 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 GPM6BQ13491 265 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 ZACNQ401N2 412 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 CBWD6Q4V339 395 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 CBWD3Q5JTY5 395 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 CBWD5Q5RIA9 395 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 KRT39Q6A163 491 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 FUT10Q6P4F1 479 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 XPO4Q9C0E2 1151 aaKnown RBP21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 GTF2H1P32780 548 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 UBASH3AP57075 661 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 NCOA4Q13772 614 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 FILIP1LQ4L180 1135 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 MIIPQ5JXC2 388 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 ELMO3Q96BJ8 720 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 ZNF560Q96MR9 790 aa21.45■■□□□ 1.02
TRAPPC12-220ENST00000482645 SF3B1O75533 1304 aaKnown RBP eCLIP21.44■■□□□ 1.023e-6■■■■■ 137.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms