RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
COL16A1-212ENST00000482478 PCDHB8Q9UN66 801 aa17.04■□□□□ 0.32
COL16A1-212ENST00000482478 PPP1R37O75864 691 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 CYP3A5P20815 502 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 FSHRP23945 695 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 LRPAP1P30533 357 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 HOXA9P31269 272 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 ELF1P32519 619 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 CASP5P51878 434 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 ALCAMQ13740 583 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 RSPO2Q6UXX9 243 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-212ENST00000482478 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 GRASPQ7Z6J2 395 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-212ENST00000482478 USP37Q86T82 979 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 CD302Q8IX05 232 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
COL16A1-212ENST00000482478 FRMD3A2A2Y4 597 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 WDR27A2RRH5 827 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.32
COL16A1-212ENST00000482478 LRG1P02750 347 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 PLA2G5P39877 138 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 YWHAHQ04917 246 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-212ENST00000482478 SLC8B1Q6J4K2 584 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 SHC4Q6S5L8 630 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 IQUBQ8NA54 791 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 ASIC4Q96FT7 647 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 MYADMQ96S97 322 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 FGFBP2Q9BYJ0 223 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 MFSD1Q9H3U5 465 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 CYP4F11Q9HBI6 524 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 CFAP45Q9UL16 551 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 PCDHB13Q9Y5F0 798 aa17.02■□□□□ 0.32
COL16A1-212ENST00000482478 TSC2P49815 1807 aa17.02■□□□□ 0.31
COL16A1-212ENST00000482478 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.31
COL16A1-212ENST00000482478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-212ENST00000482478 PPEF2O14830 753 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 ODC1P11926 461 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 NTHL1P78549 312 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 AMPD3Q01432 767 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 DNM1Q05193 864 aaKnown RBP17.01■□□□□ 0.31
COL16A1-212ENST00000482478 KCNA1Q09470 495 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 POSTNQ15063 836 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 E2F4Q16254 413 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 PABPC1LQ4VXU2 614 aaKnown RBP17.01■□□□□ 0.31
COL16A1-212ENST00000482478 FBXL6Q8N531 539 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 TSPAN18Q96SJ8 248 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 FAM213AQ9BRX8 229 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 MAGEF1Q9HAY2 307 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 KCNK12Q9HB15 430 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 EPS15L1Q9UBC2 864 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 DERAQ9Y315 318 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
COL16A1-212ENST00000482478 TIMM13Q9Y5L4 95 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-212ENST00000482478 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
COL16A1-212ENST00000482478 TDGQ13569 410 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 SPATA1Q5VX52 437 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 ARMCX5Q6P1M9 558 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 TRIM9Q9C026 710 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 ASB7Q9H672 318 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 TMEM206Q9H813 350 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
COL16A1-212ENST00000482478 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17■□□□□ 0.31
COL16A1-212ENST00000482478 IGSF9Q9P2J2 1179 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 DUSP12Q9UNI6 340 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
COL16A1-212ENST00000482478 M0QZQ0 153 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 POLR2DO15514 142 aaKnown RBP16.99■□□□□ 0.31
COL16A1-212ENST00000482478 IL18RAPO95256 599 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 PAPLNO95428 1278 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 PDGFBP01127 241 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-212ENST00000482478 POU2F2P09086 479 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 RFX1P22670 979 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 C9orf57Q5W0N0 161 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 OVOS1Q6IE37 1185 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 BRSK2Q8IWQ3 736 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 RSAD2Q8WXG1 361 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ANK1P16157 1881 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 KMT2EQ8IZD2 1858 aa16.99■□□□□ 0.31
COL16A1-212ENST00000482478 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
COL16A1-212ENST00000482478 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
COL16A1-212ENST00000482478 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms