RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
GGPS1-205ENST00000482013 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
GGPS1-205ENST00000482013 CELF4Q9BZC1 486 aaKnown RBP12.53□□□□□ -0.4
GGPS1-205ENST00000482013 XYLT2Q9H1B5 865 aa12.53□□□□□ -0.4
GGPS1-205ENST00000482013 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
GGPS1-205ENST00000482013 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
GGPS1-205ENST00000482013 CYP1A1P04798 512 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 CYP1A2P05177 515 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 MMEP08473 750 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF132P52740 706 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 YARSP54577 528 aaKnown RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 MAP3K21Q5TCX8 1036 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 PBKQ96KB5 322 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 OSMRQ99650 979 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 BCO2Q9BYV7 579 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 ABCB6Q9NP58 842 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 TAS2R14Q9NYV8 317 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 UVRAGQ9P2Y5 699 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 SIX4Q9UIU6 781 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
GGPS1-205ENST00000482013 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-205ENST00000482013 PDCD11Q14690 1871 aaKnown RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 MYADML2A6NDP7 307 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 NPTXRO95502 500 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 NFICP08651 508 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 RBP5P82980 135 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 RPS6KA1Q15418 735 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 TMEM270Q6UE05 265 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 SERINC5Q86VE9 423 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 FAM84AQ96KN4 292 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 ARID3AQ99856 593 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 ZNF518BQ9C0D4 1074 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-205ENST00000482013 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
GGPS1-205ENST00000482013 TMCO5BA8MYB1 307 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-205ENST00000482013 TRPA1O75762 1119 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 KIF4AO95239 1232 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
GGPS1-205ENST00000482013 PGK1P00558 417 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 PAEPP09466 180 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 FGFR4P22455 802 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 GNA15P30679 374 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CENPCQ03188 943 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 TMEM62Q0P6H9 643 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 ELF2Q15723 593 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CLUL1Q15846 466 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 XKR4Q5GH76 650 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 C11orf63Q6NUN7 778 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CREG2Q8IUH2 290 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 BEST2Q8NFU1 509 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 SNX27Q96L92 541 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 RPS6KC1Q96S38 1066 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 TSEN34Q9BSV6 310 aaKnown RBP12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 SAGE1Q9NXZ1 904 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 CTTNBP2NLQ9P2B4 639 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
GGPS1-205ENST00000482013 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
GGPS1-205ENST00000482013 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 UMODL1Q5DID0 1318 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
GGPS1-205ENST00000482013 THSD7BQ9C0I4 1608 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms