RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 RALGPS2Q86X27 583 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 SYNPOQ8N3V7 929 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 PPP1R10Q96QC0 940 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 EIF2AK1Q9BQI3 630 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 GPR88Q9GZN0 384 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 FZD8Q9H461 694 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 VPS45Q9NRW7 570 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 CCDC163A0A0D9SF12 145 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 TTLL13PA6NNM8 815 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 H7C4K7 107 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
HDAC6-224ENST00000481929 BAG4O95429 457 aaKnown RBP16.46■□□□□ 0.23
HDAC6-224ENST00000481929 RARRES1P49788 294 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 TEAD2Q15562 447 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 TPGS2Q68CL5 300 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 CDCA2Q69YH5 1023 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-224ENST00000481929 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 SLFN12Q8IYM2 578 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 FBXL16Q8N461 479 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 EDEM2Q9BV94 578 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 GOLGA2P5Q9HBQ8 144 aa16.46■□□□□ 0.23
HDAC6-224ENST00000481929 SRRM3A6NNA2 597 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-224ENST00000481929 EXTL3O43909 919 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 AKAP3O75969 853 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
HDAC6-224ENST00000481929 PXNP49023 591 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-224ENST00000481929 EPHA5P54756 1037 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 FCHO2Q0JRZ9 810 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 TWF1Q12792 350 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 CCINQ13939 588 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 PON2Q15165 354 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 MAPK6Q16659 721 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 DCAF4L1Q3SXM0 396 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 MAEAQ7L5Y9 396 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 TTC8Q8TAM2 541 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 RSPRY1Q96DX4 576 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 TMEM121BQ9BXQ6 578 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-224ENST00000481929 AGXT2Q9BYV1 514 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 C2orf40Q9H1Z8 148 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 CEP72Q9P209 647 aa16.45■□□□□ 0.22
HDAC6-224ENST00000481929 CPLX1O14810 134 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 GIPC1O14908 333 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 SYN3O14994 580 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 SPINK2P20155 84 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 TCEAL6Q6IPX3 200 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 LRSAM1Q6UWE0 723 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 HAUS6Q7Z4H7 955 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 SHKBP1Q8TBC3 707 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 TCEAL3Q969E4 200 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 HSD17B14Q9BPX1 270 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
HDAC6-224ENST00000481929 FBXL5Q9UKA1 691 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
HDAC6-224ENST00000481929 ACKR2O00590 384 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 LIG1P18858 919 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 EEF1DP3Q658K8 133 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 ZCCHC14Q8WYQ9 949 aaKnown RBP16.43■□□□□ 0.22
HDAC6-224ENST00000481929 ZC3H10Q96K80 434 aaKnown RBP16.43■□□□□ 0.22
HDAC6-224ENST00000481929 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 MAFFQ9ULX9 164 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 KCNJ14Q9UNX9 436 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 SLC8A2Q9UPR5 921 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 WASF3Q9UPY6 502 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 USP20Q9Y2K6 914 aa16.43■□□□□ 0.22
HDAC6-224ENST00000481929 C4orf47A7E2U8 309 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 PODXLO00592 558 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 DPYSL4O14531 572 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 RING1Q06587 406 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 SH3PXD2AQ5TCZ1 1133 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 PIK3AP1Q6ZUJ8 805 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 GATA6Q92908 595 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-224ENST00000481929 NUB1Q9Y5A7 615 aa16.42■□□□□ 0.22
HDAC6-224ENST00000481929 SMIM28A0A1B0GU29 152 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 A0A1W2PRU2 124 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 CPB1P15086 417 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 EVCP57679 992 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-224ENST00000481929 MRPL58Q14197 206 aaKnown RBP16.41■□□□□ 0.22
HDAC6-224ENST00000481929 ELF2Q15723 593 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 PLK5Q496M5 336 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 PKN3Q6P5Z2 889 aa16.41■□□□□ 0.22
HDAC6-224ENST00000481929 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
HDAC6-224ENST00000481929 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms