RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SYT1P21579 422 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 ELF1P32519 619 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 GPC5P78333 572 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 ZBTB6Q15916 424 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 ENOX2Q16206 610 aaKnown RBP20.21■□□□□ 0.83
CLK1-211ENST00000481641 SLC5A9Q2M3M2 681 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 ZC2HC1CQ53FD0 456 aaPredicted RBP20.21■□□□□ 0.83
CLK1-211ENST00000481641 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 KCNN1Q92952 543 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 CCSER1Q9C0I3 900 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 TBC1D17Q9HA65 648 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 CYP4F11Q9HBI6 524 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 FBXO2Q9UK22 296 aaPredicted RBP20.21■□□□□ 0.83
CLK1-211ENST00000481641 ARHGEF37A1IGU5 675 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 TISP43B9A030 160 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 ANKRD63C9JTQ0 380 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 PPEF2O14830 753 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 OGTO15294 1046 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 TBCAO75347 108 aaKnown RBP20.2■□□□□ 0.82
CLK1-211ENST00000481641 PIGRP01833 764 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 LRG1P02750 347 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 ATF2P15336 505 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 PDCP20941 246 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 RFX1P22670 979 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 DDIT3P35638 169 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 PPP2R3AQ06190 1150 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 DYMQ7RTS9 669 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 MCRS1Q96EZ8 462 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 KXD1Q9BQD3 176 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 RTP3Q9BQQ7 232 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 MSTO1Q9BUK6 570 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 IKZF4Q9H2S9 585 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 RPF1Q9H9Y2 349 aaKnown RBP20.2■□□□□ 0.82
CLK1-211ENST00000481641 PCDHB8Q9UN66 801 aa20.2■□□□□ 0.82
CLK1-211ENST00000481641 MRPS23Q9Y3D9 190 aaKnown RBP20.2■□□□□ 0.82
CLK1-211ENST00000481641 COL4A3Q01955 1670 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 MYO15AQ9UKN7 3530 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 A0A0B4J269 797 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 NRG2O14511 850 aaPredicted RBP20.19■□□□□ 0.82
CLK1-211ENST00000481641 CEBPBP17676 345 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 LRPAP1P30533 357 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 GTF2BQ00403 316 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 ZNF280DQ6N043 979 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 RTL10Q7L3V2 364 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 DTWD2Q8NBA8 298 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 APPL2Q8NEU8 664 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 TCEAL4Q96EI5 215 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 CORO1BQ9BR76 489 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 ARHGEF3Q9NR81 526 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 KCNH3Q9ULD8 1083 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 UBQLN1Q9UMX0 589 aaKnown RBP20.19■□□□□ 0.82
CLK1-211ENST00000481641 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
CLK1-211ENST00000481641 GFRA3O60609 400 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 OR4Q2P0C623 313 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 PTPN2P17706 415 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 ADCY1Q08828 1119 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 JADE1Q6IE81 842 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 RNF19BQ6ZMZ0 732 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 MTSS1LQ765P7 747 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 SFR1Q86XK3 245 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 MAP4K3Q8IVH8 894 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 TCEAL8Q8IYN2 117 aa20.18■□□□□ 0.82
CLK1-211ENST00000481641 CPSF3Q9UKF6 684 aaKnown RBP20.18■□□□□ 0.82
CLK1-211ENST00000481641 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
CLK1-211ENST00000481641 M0QZQ0 153 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 DCNP07585 359 aaKnown RBP20.17■□□□□ 0.82
CLK1-211ENST00000481641 CPB1P15086 417 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 CYP3A5P20815 502 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 ACOT2P49753 483 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 SNW1Q13573 536 aaKnown RBP20.17■□□□□ 0.82
CLK1-211ENST00000481641 KYAT1Q16773 422 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 TPGS2Q68CL5 300 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 DSTYKQ6XUX3 929 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 HS6ST3Q8IZP7 471 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 KRI1Q8N9T8 703 aaKnown RBP20.17■□□□□ 0.82
CLK1-211ENST00000481641 BACH2Q9BYV9 841 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 PLA2G2FQ9BZM2 168 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 FOXQ1Q9C009 403 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 MTMR6Q9Y217 621 aa20.17■□□□□ 0.82
CLK1-211ENST00000481641 MYMKA6NI61 221 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 ADRB2P07550 413 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 NFICP08651 508 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 CCR2P41597 374 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLK1-211ENST00000481641 YWHAHQ04917 246 aaPredicted RBP20.16■□□□□ 0.82
CLK1-211ENST00000481641 TWF1Q12792 350 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 ANGPT1Q15389 498 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 PRSS36Q5K4E3 855 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 SPATA1Q5VX52 437 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 RRAGBQ5VZM2 374 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 FRMD5Q7Z6J6 570 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 TBC1D7Q9P0N9 293 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 CEP72Q9P209 647 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms