RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 PACSIN2Q9UNF0 486 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-216ENST00000481242 COL5A2P05997 1499 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-216ENST00000481242 A0A1W2PQJ5 194 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 RASA4BC9J798 803 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 RASA4O43374 803 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 SPAG6O75602 509 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 F9P00740 461 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 GNL1P36915 607 aaPredicted RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 SLCO1A2P46721 670 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 RPL10AP62906 217 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 DEUP1Q05D60 604 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 STK4Q13043 487 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 C4orf19Q8IY42 314 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 FBXO41Q8TF61 875 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 APOBEC2Q9Y235 224 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 UPP2O95045 317 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 DSG3P32926 999 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 EIF3EP60228 445 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 SLC12A1Q13621 1099 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 PTK2BQ14289 1009 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 TRADDQ15628 312 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 NFE2Q16621 373 aaPredicted RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 PLA2G4FQ68DD2 849 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 CCDC137Q6PK04 289 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 C15orf52Q6ZUT6 534 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 CATSPER3Q86XQ3 398 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 ATPAF2Q8N5M1 289 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 CALML6Q8TD86 181 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 GFM2Q969S9 779 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 TSPAN17Q96FV3 270 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.81
GARNL3-216ENST00000481242 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 NWD1Q149M9 1564 aa9.96□□□□□ -0.81
GARNL3-216ENST00000481242 ATP5HO75947 161 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 LRG1P02750 347 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 RALBP11234 206 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 THPOP40225 353 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 HERVK_113P62684 666 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 IMPG1Q17R60 797 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 MGAT5BQ3V5L5 792 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 PDCD7Q8N8D1 485 aaKnown RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 UCMAQ8WVF2 138 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 SH3KBP1Q96B97 665 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 KLHL29Q96CT2 875 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 OLFML3Q9NRN5 406 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 THEGQ9P2T0 379 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 PAIP2BQ9ULR5 123 aaKnown RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 DEPDC5O75140 1603 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 TEX33O43247 280 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 NPM3O75607 178 aaKnown RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 ZMYND10O75800 440 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 ESRRAP11474 423 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 STAT4Q14765 748 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 Q4G0T1 1027 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 MEI1Q5TIA1 1274 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 TDRD10Q5VZ19 366 aaKnown RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 TBC1D1Q86TI0 1168 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 TTC30AQ86WT1 665 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.82
GARNL3-216ENST00000481242 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-216ENST00000481242 NAB2Q15742 525 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 PTPN21Q16825 1174 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 PPM1NQ8N819 430 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 RNPC3Q96LT9 517 aaKnown RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 EGFL8Q99944 293 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 VPS11Q9H270 941 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 OLA1Q9NTK5 396 aaKnown RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 MSCO60682 206 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 PYGBP11216 843 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 AMPD2Q01433 879 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 NBPF12Q5TAG4 269 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 LMBRD2Q68DH5 695 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 MPZL3Q6UWV2 235 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 ATP6V0D2Q8N8Y2 350 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 OPTNQ96CV9 577 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 CYTH2Q99418 400 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 PITPNM3Q9BZ71 974 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 TRPC7Q9HCX4 862 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 NDE1Q9NXR1 346 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 ZFATQ9P243 1243 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 VPS9D1Q9Y2B5 631 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 SLC30A1Q9Y6M5 507 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 TARSL2A2RTX5 802 aaKnown RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 NPTXRO95502 500 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 ESRRBO95718 433 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 HIST1H2AGP0C0S8 130 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-216ENST00000481242 TMEM253P0C7T8 217 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 HIST1H2ADP20671 130 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 ETFBP38117 255 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 NPEPPSP55786 919 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 MTFR1Q15390 333 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 TEDDM1Q5T9Z0 273 aa9.95□□□□□ -0.82
GARNL3-216ENST00000481242 CYP4A22Q5TCH4 519 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms