RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TUSC3Q13454 348 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 ME3Q16798 604 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 CDCA2Q69YH5 1023 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 VITQ6UXI7 678 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 CACNA2D4Q7Z3S7 1137 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 DIS3L2Q8IYB7 885 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 NSUN7Q8NE18 718 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 LNX1Q8TBB1 728 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 GAB3Q8WWW8 586 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 IRF7Q92985 503 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 GTF3C6Q969F1 213 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 TCEAL4Q96EI5 215 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 MTMR9Q96QG7 549 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 TTPALQ9BTX7 342 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 TMEM60Q9H2L4 133 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 PDZD7Q9H5P4 517 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 ZFP14Q9HCL3 533 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 PRMT7Q9NVM4 692 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 GPSM3Q9Y4H4 160 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 NOTCH4Q99466 2003 aa10.4□□□□□ -0.75
SMARCE1-210ENST00000481231 TICRRQ7Z2Z1 1910 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 SLC38A8A6NNN8 435 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 EXTL3O43909 919 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 JAK2O60674 1132 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 RECQL4O94761 1208 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 POU2F2P09086 479 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 CCDC192P0DO97 292 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 XRCC6P12956 609 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 VIPR2P41587 438 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 LRRC32Q14392 662 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 ANKRD1Q15327 319 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 FAM187BQ17R55 369 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 COL28A1Q2UY09 1125 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 MCPH1Q8NEM0 835 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 CXCL16Q9H2A7 254 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 FZD8Q9H461 694 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 VPS45Q9NRW7 570 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 SNTG2Q9NY99 539 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 USP20Q9Y2K6 914 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 ARID2Q68CP9 1835 aa10.39□□□□□ -0.75
SMARCE1-210ENST00000481231 LNP1A1A4G5 178 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ARNTLO00327 626 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 N4BP3O15049 544 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 MED24O75448 989 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 EDN1P05305 212 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 PSMC3P17980 439 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ATP2B1P20020 1258 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 OR1D2P34982 312 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 CCR2P41597 374 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ANAPC15P60006 121 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 NAB2Q15742 525 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 DAB2IPQ5VWQ8 1189 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 PKN3Q6P5Z2 889 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 TXNDC11Q6PKC3 985 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 CATSPER3Q86XQ3 398 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 NOSTRINQ8IVI9 506 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ZBTB8OSQ8IWT0 167 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 DEFB124Q8NES8 71 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ZSWIM3Q96MP5 696 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 ASB16Q96NS5 453 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 CCDC113Q9H0I3 377 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 C2orf40Q9H1Z8 148 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 TUFT1Q9NNX1 390 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 NEUROG3Q9Y4Z2 214 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 PCDHGA5Q9Y5G8 931 aa10.38□□□□□ -0.75
SMARCE1-210ENST00000481231 CELSR3Q9NYQ7 3312 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 WDR27A2RRH5 827 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 ACKR2O00590 384 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 ZNF263O14978 683 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 PRKCBP05771 671 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 THP07101 528 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 CEACAM1P13688 526 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 IGFBP6P24592 240 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 HOXA6P31267 233 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 MCM7P33993 719 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 PRPF4BQ13523 1007 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 MAPK6Q16659 721 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 PRSS36Q5K4E3 855 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 EEF1DP3Q658K8 133 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 PROSER1Q86XN7 944 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 ADAM32Q8TC27 787 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 NACC1Q96RE7 527 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 CORO1BQ9BR76 489 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 POLR3CQ9BUI4 534 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 KIFC3Q9BVG8 833 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 TRPV5Q9NQA5 729 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 POLR3BQ9NW08 1133 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 GDAQ9Y2T3 454 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 MSRB2Q9Y3D2 182 aa10.37□□□□□ -0.75
SMARCE1-210ENST00000481231 ARHGEF35A5YM69 484 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 SEC24BO95487 1268 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 LIG1P18858 919 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms