RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 TRIM5Q9C035 493 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 ERVK-5Q9HDB9 667 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 CLDND1Q9NY35 253 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 SH3BGRL2Q9UJC5 107 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 PCDHA13Q9Y5I0 950 aa8.87□□□□□ -0.99
LSM5-210ENST00000480956 LOC100289279A0A1B0GTE1 492 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 CCDC78A2IDD5 438 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
LSM5-210ENST00000480956 LRIG2O94898 1065 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 PRAMEF1O95521 474 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 FNTBP49356 437 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 KCNB1Q14721 858 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 EEF1DP3Q658K8 133 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 ATG16L1Q676U5 607 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 SHQ1Q6PI26 577 aaKnown RBP8.86□□□□□ -0.99
LSM5-210ENST00000480956 RAB11FIP4Q86YS3 637 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 IL22RA1Q8N6P7 574 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 GLIS1Q8NBF1 620 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 KCNG4Q8TDN1 519 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 CUL5Q93034 780 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 FATE1Q969F0 183 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 NMD3Q96D46 503 aaKnown RBP8.86□□□□□ -0.99
LSM5-210ENST00000480956 ACAT2Q9BWD1 397 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 KCNH7Q9NS40 1196 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 FBXL7Q9UJT9 491 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 SMC3Q9UQE7 1217 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 USP15Q9Y4E8 981 aaPredicted RBP8.86□□□□□ -0.99
LSM5-210ENST00000480956 PCDHA3Q9Y5H8 950 aa8.86□□□□□ -0.99
LSM5-210ENST00000480956 ST20-MTHFSA0A0A6YYL1 179 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 NPHP3-ACAD11A0A0J9YXS1 232 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 C2CD2LO14523 706 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 FCHO1O14526 889 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 MT-ND5P03915 603 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 EEF2P13639 858 aaKnown RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 ADSLP30566 484 aaPredicted RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 ADH7P40394 386 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ETV3P41162 512 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 KCNC1P48547 511 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 RCAN1P53805 252 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 NLRP12P59046 1061 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.85□□□□□ -0.99
LSM5-210ENST00000480956 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 EPS8Q12929 822 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TRIM25Q14258 630 aaKnown RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 ADRM1Q16186 407 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 RCSD1Q6JBY9 416 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 C11orf88Q6PI97 169 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 KLHL24Q6TFL4 600 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 RNF44Q7L0R7 432 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 THNSL1Q8IYQ7 743 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ADSSL1Q8N142 457 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 PABPC3Q9H361 631 aaKnown RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 ATXN3LQ9H3M9 355 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ERVMER34-1Q9H9K5 563 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 SARS2Q9NP81 518 aaKnown RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 COG5Q9UP83 839 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 NUMBLQ9Y6R0 609 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TRBV23OR9-2A0A075B6M9 112 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 SYNJ2BP-COX16A0A087WUM0 186 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 AGAP14A8MT82 685 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 H3BNC9 293 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 CLASP2O75122 1294 aaKnown RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 SLC22A3O75751 556 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ACTL6BO94805 426 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TYRP14679 529 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TGM1P22735 817 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 GALNT2Q10471 571 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TBCEQ15813 527 aaPredicted RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 RNFT1Q5M7Z0 435 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ATPAF1Q5TC12 328 aaPredicted RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 PXKQ7Z7A4 578 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 CDH24Q86UP0 819 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 TTC39CQ8N584 583 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 SDCCAG3Q96C92 435 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 MOGAT1Q96PD6 335 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 ADI1Q9BV57 179 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 CARD10Q9BWT7 1032 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.85□□□□□ -0.99
LSM5-210ENST00000480956 TMPRSS11EQ9UL52 423 aa8.85□□□□□ -0.99
LSM5-210ENST00000480956 LMTK3Q96Q04 1460 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 KRBA1A5PL33 1030 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 TMEM110-MUSTN1A8MSY1 372 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 PTGES3LE9PB15 166 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 DDX39AO00148 427 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 PES1O00541 588 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 AFPP02771 609 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 COL6A2P12110 1019 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 LAMP2P13473 410 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 KRT13P13646 458 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 GMPRP36959 345 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 CTSKP43235 329 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 PNLIPRP1P54315 467 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 AKAP17AQ02040 695 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 LRRC74AQ0VAA2 488 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 GAS6Q14393 721 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 MUM1L1Q5H9M0 696 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms