RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TNFSF9P41273 254 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 GRIN1Q05586 938 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 PPP2R3AQ06190 1150 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
LIMS3-203ENST00000480744 SLC5A9Q2M3M2 681 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 PHLDB3Q6NSJ2 640 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 BRAPQ7Z569 592 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 LRRC15Q8TF66 581 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 DDX12PQ92771 950 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
LIMS3-203ENST00000480744 CORO1BQ9BR76 489 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 PCDHB8Q9UN66 801 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 SIT1Q9Y3P8 196 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 INSL5Q9Y5Q6 135 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 TBC1D4O60343 1298 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 SEC24AO95486 1093 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 ATF2P15336 505 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 CEBPBP17676 345 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
LIMS3-203ENST00000480744 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
LIMS3-203ENST00000480744 MRPL58Q14197 206 aaKnown RBP16.6■□□□□ 0.25
LIMS3-203ENST00000480744 ZBTB41Q5SVQ8 909 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 TCEAL8Q8IYN2 117 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 RAD54LQ92698 747 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 SHDQ96IW2 340 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 RPF1Q9H9Y2 349 aaKnown RBP16.6■□□□□ 0.25
LIMS3-203ENST00000480744 PLEKHA5Q9HAU0 1116 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 PARVGQ9HBI0 331 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
LIMS3-203ENST00000480744 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
LIMS3-203ENST00000480744 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 LACTBL1A8MY62 500 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 TRAK2O60296 914 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 GUCY2FP51841 1108 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 ADCY1Q08828 1119 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 MLF2Q15773 248 aaPredicted RBP16.59■□□□□ 0.25
LIMS3-203ENST00000480744 KYAT1Q16773 422 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
LIMS3-203ENST00000480744 TIMM13Q9Y5L4 95 aaPredicted RBP16.59■□□□□ 0.25
LIMS3-203ENST00000480744 PTPRZ1P23471 2315 aaPredicted RBP16.59■□□□□ 0.25
LIMS3-203ENST00000480744 FAM186AA6NE01 2351 aa16.58■□□□□ 0.25
LIMS3-203ENST00000480744 MYO15AQ9UKN7 3530 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 OGTO15294 1046 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 XPOTO43592 962 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 LRRN2O75325 713 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 LRPAP1P30533 357 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 ZNF131P52739 623 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 PFKPQ01813 784 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 SLC44A4Q53GD3 710 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 IQCEQ6IPM2 695 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 DSTYKQ6XUX3 929 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 RNF19BQ6ZMZ0 732 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 PDZD4Q76G19 769 aaPredicted RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 USP37Q86T82 979 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 PJA1Q8NG27 643 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 LARP4BQ92615 738 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 TCEAL4Q96EI5 215 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 GDE1Q9NZC3 331 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 CACNA1IQ9P0X4 2223 aa16.58■□□□□ 0.24
LIMS3-203ENST00000480744 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.24
LIMS3-203ENST00000480744 TSC2P49815 1807 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 PATJQ8NI35 1801 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 M0QZQ0 153 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 ZNF197O14709 1029 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 ECI2O75521 394 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 PIGRP01833 764 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 CYP3A5P20815 502 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 SCP2P22307 547 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 STARD6P59095 220 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 TWF1Q12792 350 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 UBXN2BQ14CS0 331 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 CYP4A22Q5TCH4 519 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 HS6ST3Q8IZP7 471 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 ZNF512Q96ME7 567 aaPredicted RBP16.57■□□□□ 0.24
LIMS3-203ENST00000480744 BACH2Q9BYV9 841 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 PLA2G2FQ9BZM2 168 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
LIMS3-203ENST00000480744 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
LIMS3-203ENST00000480744 SCN1AP35498 2009 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 TICRRQ7Z2Z1 1910 aa16.57■□□□□ 0.24
LIMS3-203ENST00000480744 VPS13AQ96RL7 3174 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 A0A0B4J269 797 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 KANSL1LA0AUZ9 987 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 PPEF2O14830 753 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 FAM189A1O60320 539 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 MYL4P12829 197 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 PDCP20941 246 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 PRKCQQ04759 706 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 ZBTB6Q15916 424 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms