RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 PAK1Q13153 545 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 PNOCQ13519 176 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ADGRE1Q14246 886 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 PTPN14Q15678 1187 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ZACNQ401N2 412 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 SV2CQ496J9 727 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 CCDC183Q5T5S1 534 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 TTI2Q6NXR4 508 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 CD300LGQ6UXG3 332 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 FILIP1Q7Z7B0 1213 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 TOP6BLQ8N6T0 577 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ATXN2LQ8WWM7 1075 aaKnown RBP5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 STAMQ92783 540 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 LPPQ93052 612 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 KIF12Q96FN5 646 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ANKRD36BP1Q96IX9 119 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 CHAMP1Q96JM3 812 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ZBTB45Q96K62 511 aaPredicted RBP5.5□□□□□ -1.53
HDAC6-223ENST00000480525 FNBP1Q96RU3 617 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 BPIFA3Q9BQP9 254 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 TTPALQ9BTX7 342 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 FGFBP2Q9BYJ0 223 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 AVENQ9NQS1 362 aaPredicted RBP5.5□□□□□ -1.53
HDAC6-223ENST00000480525 MRPL17Q9NRX2 175 aaKnown RBP5.5□□□□□ -1.53
HDAC6-223ENST00000480525 MIOSQ9NXC5 875 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 MTRRQ9UBK8 725 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 DNAJB4Q9UDY4 337 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 PRKAG3Q9UGI9 489 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 ZMYM5Q9UJ78 669 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 MAN1B1Q9UKM7 699 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 PCDHB8Q9UN66 801 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 FAM50BQ9Y247 325 aa5.5□□□□□ -1.53
HDAC6-223ENST00000480525 EPOPA6NHQ4 379 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LRRC10BA6NIK2 292 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 OR6C75A6NL08 312 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GABRDO14764 452 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 B4GALT3O60512 393 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 MICAL2O94851 1124 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ABLIM3O94929 683 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 KIF4AO95239 1232 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 TNNC2P02585 160 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 HNRNPA1P09651 372 aaKnown RBP eCLIP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 EPB41P11171 864 aaKnown RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ODC1P11926 461 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 P4HA1P13674 534 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 BMP6P22004 513 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 RFX1P22670 979 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 MATR3P43243 847 aaKnown RBP eCLIP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LHX1P48742 406 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ACOT2P49753 483 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GATMP50440 423 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 CLCNKBP51801 687 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 RBP5P82980 135 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 MYO1EQ12965 1108 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ADAM9Q13443 819 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ADAM15Q13444 863 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 RAB33AQ14088 237 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 MAPRE1Q15691 268 aaKnown RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 MEA1Q16626 185 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LEXMQ3ZCV2 418 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 SPOUT1Q5T280 376 aaKnown RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 C9orf57Q5W0N0 161 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 KRT39Q6A163 491 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 JADE1Q6IE81 842 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ZNF280DQ6N043 979 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LILRA6Q6PI73 481 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 TMCO2Q7Z6W1 182 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ZBTB33Q86T24 672 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 CBWD2Q8IUF1 395 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 FAM114A1Q8IWE2 563 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 EFCAB13Q8IY85 973 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GRAMD1CQ8IYS0 662 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 VPS52Q8N1B4 723 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 C1orf127Q8N9H9 656 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LEMD2Q8NC56 503 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 RNF169Q8NCN4 708 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 LNX1Q8TBB1 728 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ENOX1Q8TC92 643 aaKnown RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GPT2Q8TD30 523 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 CASP10Q92851 521 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 FUBP3Q96I24 572 aaKnown RBP eCLIP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 NECTIN4Q96NY8 510 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 TCF25Q9BQ70 676 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ACBD6Q9BR61 282 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 FAM213AQ9BRX8 229 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 VN1R3Q9BXE9 311 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 DNAI2Q9GZS0 605 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GZF1Q9H116 711 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-223ENST00000480525 PRDM12Q9H4Q4 367 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 TMEM8AQ9HCN3 771 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ZDHHC7Q9NXF8 308 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 DPP3Q9NY33 737 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 INPP5FQ9Y2H2 1132 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
HDAC6-223ENST00000480525 ZFP37Q9Y6Q3 630 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms