RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 DUOXA2Q1HG44 320 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 HGSNATQ68CP4 663 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.24□□□□□ -0.61
LINC00173-203ENST00000480237 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 WNT8BQ93098 351 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 ACAP3Q96P50 834 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 PI4K2AQ9BTU6 479 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 UNC93B1Q9H1C4 597 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 STARD7Q9NQZ5 370 aa11.24□□□□□ -0.61
LINC00173-203ENST00000480237 BZW2Q9Y6E2 419 aaKnown RBP11.24□□□□□ -0.61
LINC00173-203ENST00000480237 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 LACTBL1A8MY62 500 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 B4GALT4O60513 344 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 VNN1O95497 513 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 NFICP08651 508 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 TNNT1P13805 278 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 PRKCIP41743 596 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 TRPC3Q13507 836 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 TWF2Q6IBS0 349 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 ENOSF1Q7L5Y1 443 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 KAT5Q92993 513 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 APOL6Q9BWW8 343 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 EIF2AQ9BY44 585 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 LZTFL1Q9NQ48 299 aa11.23□□□□□ -0.61
LINC00173-203ENST00000480237 TRMT13Q9NUP7 481 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 NOC2LQ9Y3T9 749 aaKnown RBP11.23□□□□□ -0.61
LINC00173-203ENST00000480237 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 C1QTNF8P60827 252 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 PTK2Q05397 1052 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 PTK7Q13308 1070 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 SPOPLQ6IQ16 392 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 IRF2BP2Q7Z5L9 587 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 JAKMIP2Q96AA8 810 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 ELMO3Q96BJ8 720 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 KREMEN1Q96MU8 473 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 IFIH1Q9BYX4 1025 aaKnown RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 GPR88Q9GZN0 384 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 NXF3Q9H4D5 531 aaKnown RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 ASB7Q9H672 318 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
LINC00173-203ENST00000480237 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
LINC00173-203ENST00000480237 FOXN3O00409 490 aaPredicted RBP11.21□□□□□ -0.61
LINC00173-203ENST00000480237 DNM1LO00429 736 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 RECQL4O94761 1208 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 LCA5LO95447 670 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 CHRNA1P02708 482 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 CFHP08603 1231 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 KRT19P08727 400 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 CCL5P13501 91 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 KRT5P13647 590 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
LINC00173-203ENST00000480237 ANXA13P27216 316 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 VAV2P52735 878 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 GCNT1Q02742 428 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 GFPT1Q06210 699 aaPredicted RBP11.21□□□□□ -0.61
LINC00173-203ENST00000480237 MGAT3Q09327 533 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 ZNF699Q32M78 642 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 SLC10A6Q3KNW5 377 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 CD302Q8IX05 232 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 HELQQ8TDG4 1101 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 SHC3Q92529 594 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 ZNF592Q92610 1267 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 SNX27Q96L92 541 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 DEFB118Q96PH6 123 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 RNF208Q9H0X6 261 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
LINC00173-203ENST00000480237 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
LINC00173-203ENST00000480237 GBF1Q92538 1859 aa11.21□□□□□ -0.62
LINC00173-203ENST00000480237 A0A0U1RQJ8 604 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 ASS1P00966 412 aaKnown RBP11.2□□□□□ -0.62
LINC00173-203ENST00000480237 MYL6P60660 151 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
LINC00173-203ENST00000480237 PAK2Q13177 524 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 CUL2Q13617 745 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 MTFR1Q15390 333 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 SLC18A3Q16572 532 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 ASTE1Q2TB18 679 aaPredicted RBP11.2□□□□□ -0.62
LINC00173-203ENST00000480237 ZNF571Q7Z3V5 609 aaPredicted RBP11.2□□□□□ -0.62
LINC00173-203ENST00000480237 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 ATRIPQ8WXE1 791 aa11.2□□□□□ -0.62
LINC00173-203ENST00000480237 DHX38Q92620 1227 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms