RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 SLMAPQ14BN4 828 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 GPRC5DQ9NZD1 345 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
PKD1-213ENST00000480227 TNFSF9P41273 254 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
PKD1-213ENST00000480227 FBXW10Q5XX13 1052 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 CHST13Q8NET6 341 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 DNAJC17Q9NVM6 304 aaKnown RBP18.24■□□□□ 0.51
PKD1-213ENST00000480227 ATXN2Q99700 1313 aaKnown RBP18.24■□□□□ 0.51
PKD1-213ENST00000480227 CNTNAP2Q9UHC6 1331 aa18.24■□□□□ 0.51
PKD1-213ENST00000480227 IGKV6D-21A0A0A0MT36 114 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 TP73O15350 636 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 PIGRP01833 764 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 NF2P35240 595 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 SLFN12LQ6IEE8 588 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 CPLX4Q7Z7G2 160 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 DDX27Q96GQ7 796 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 FAM81BQ96LP2 452 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 XPO6Q96QU8 1125 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 DDX23Q9BUQ8 820 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 NIFKQ9BYG3 293 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 CCDC113Q9H0I3 377 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 R3HDM2Q9Y2K5 976 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 SNCAIPQ9Y6H5 919 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ACSL3O95573 720 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 CLTAP09496 248 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ABCD1P33897 745 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 GJC1P36383 396 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 VPS41P49754 854 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 BPIFB4P59827 614 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 NOMO3P69849 1222 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ADCY2Q08462 1091 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 CCDC38Q502W7 563 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 NOL9Q5SY16 702 aaKnown RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 C6orf118Q5T5N4 469 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 MMS22LQ6ZRQ5 1243 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 RBBP8NLQ8NC74 664 aaPredicted RBP18.23■□□□□ 0.51
PKD1-213ENST00000480227 CGRRF1Q99675 332 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 ADAM22Q9P0K1 906 aa18.23■□□□□ 0.51
PKD1-213ENST00000480227 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
PKD1-213ENST00000480227 MCM3APO60318 1980 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 RASGRF2O14827 1237 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 MARK3P27448 753 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 SSR1P43307 286 aaKnown RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 TAS2R40P59535 323 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 SF3A3Q12874 501 aaKnown RBP eCLIP18.22■□□□□ 0.515e-7■■■□□ 14.8
PKD1-213ENST00000480227 NCOA4Q13772 614 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 ERMARDQ5T6L9 678 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 YTHDF3Q7Z739 585 aaKnown RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 NCAPG2Q86XI2 1143 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 SEC16BQ96JE7 1060 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 CABS1Q96KC9 395 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 ADAM7Q9H2U9 754 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 KCNG1Q9UIX4 513 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 H0YHG0 523 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 THAP12O43422 761 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 MYBL1P10243 752 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 CHKAP35790 457 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 TCF7P36402 384 aaPredicted RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 SLC1A1P43005 524 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 MMP13P45452 471 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 STAT5BP51692 787 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 MAMLD1Q13495 774 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 TARBP2Q15633 366 aaKnown RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 LY6KQ17RY6 165 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 SH3D19Q5HYK7 790 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 C6orf89Q6UWU4 347 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 TRIM50Q86XT4 487 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 TRIM11Q96F44 468 aa18.22■□□□□ 0.51
PKD1-213ENST00000480227 CDC42EP4Q9H3Q1 356 aaKnown RBP18.22■□□□□ 0.51
PKD1-213ENST00000480227 MGAMO43451 1857 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 PROSCO94903 275 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 RALAP11233 206 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 LONRF1Q17RB8 773 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 FAM212AQ96EL1 285 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 CHMP6Q96FZ7 201 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 FAM129AQ9BZQ8 928 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 AAASQ9NRG9 546 aa18.21■□□□□ 0.51
PKD1-213ENST00000480227 ADCY3O60266 1144 aa18.2■□□□□ 0.5
PKD1-213ENST00000480227 LDHAP00338 332 aaKnown RBP18.2■□□□□ 0.5
PKD1-213ENST00000480227 AUHQ13825 339 aaKnown RBP18.2■□□□□ 0.5
PKD1-213ENST00000480227 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
PKD1-213ENST00000480227 C3orf20Q8ND61 904 aa18.2■□□□□ 0.5
PKD1-213ENST00000480227 SLCO2A1Q92959 643 aa18.2■□□□□ 0.5
PKD1-213ENST00000480227 ZNF668Q96K58 619 aaPredicted RBP18.2■□□□□ 0.5
PKD1-213ENST00000480227 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
PKD1-213ENST00000480227 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms