RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TXKP42681 527 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 NASPP49321 788 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 SARSP49591 514 aaKnown RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 EFNA5P52803 228 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 PTENP60484 403 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 TAP1Q03518 808 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 NCBP1Q09161 790 aaKnown RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 PAK2Q13177 524 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 GNL2Q13823 731 aaKnown RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 LRP8Q14114 963 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 TFDP1Q14186 410 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 PPP2R5AQ15172 486 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 HP1BP3Q5SSJ5 553 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 KRT79Q5XKE5 535 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CDCA2Q69YH5 1023 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 BEND4Q6ZU67 534 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 FERMT3Q86UX7 667 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 FAM228AQ86W67 206 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 TRIM42Q8IWZ5 723 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 SLC17A8Q8NDX2 589 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 FBF1Q8TES7 1133 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 KIFAP3Q92845 792 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CEP170P1Q96L14 293 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 GUCD1Q96NT3 240 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 TSPAN18Q96SJ8 248 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CDX2Q99626 313 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 FAM83CQ9BQN1 747 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CORO1BQ9BR76 489 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 MRPL9Q9BYD2 267 aaKnown RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CCSER1Q9C0I3 900 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 C2orf40Q9H1Z8 148 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM60Q9H2L4 133 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 KCNF1Q9H3M0 494 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 AGO3Q9H9G7 860 aaKnown RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 ZFYVE1Q9HBF4 777 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 ATP6V0A4Q9HBG4 840 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 IFT122Q9HBG6 1241 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 WRAP73Q9P2S5 460 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-213ENST00000480102 LZTS1Q9Y250 596 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 COL4A3BPQ9Y5P4 624 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 SMCHD1A6NHR9 2005 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 MUC3AQ02505 3323 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 COL6A3P12111 3177 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CHD7Q9P2D1 2997 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 A0A1B0GUA9 196 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 H0YCG3 227 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 H3BNC9 293 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 CHMP2AO43633 222 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 STX6O43752 255 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 PPP6R2O75170 966 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 PAPLNO95428 1278 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ECEL1O95672 775 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 EYA4O95677 639 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 GHRP10912 638 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ZNF16P17020 682 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ZSCAN20P17040 1043 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 SYT1P21579 422 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 CD52P31358 61 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 MCM7P33993 719 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 PPM1AP35813 382 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 NAMPTP43490 491 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 POLGP54098 1239 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 NLRP11P59045 1033 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 EMC2Q15006 297 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 SLC39A14Q15043 492 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 UGCGQ16739 394 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 SGO2Q562F6 1265 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ARTNQ5T4W7 220 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 CNNM4Q6P4Q7 775 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 DEFB128Q7Z7B8 93 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 MRPL10Q7Z7H8 261 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 RTN4RL1Q86UN2 441 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 METTL13Q8N6R0 699 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM40Q8WWA1 233 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 PRPF31Q8WWY3 499 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 LINC01599Q8WXQ3 324 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 DYDC2Q96IM9 177 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 DRC1Q96MC2 740 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 PYM1Q9BRP8 204 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 C11orf84Q9BUA3 381 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM117Q9H0C3 514 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 TMX1Q9H3N1 280 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 FZD8Q9H461 694 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ST6GALNAC4Q9H4F1 302 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 XPNPEP1Q9NQW7 623 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 AGPAT5Q9NUQ2 364 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 RGL1Q9NZL6 768 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 SUCLA2Q9P2R7 463 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 LRWD1Q9UFC0 647 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ODF2LQ9ULJ1 636 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ST3GAL5Q9UNP4 418 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 COG5Q9UP83 839 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 DNM3Q9UQ16 869 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 AKT3Q9Y243 479 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 YBX2Q9Y2T7 364 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 NOC2LQ9Y3T9 749 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 SRPRBQ9Y5M8 271 aaKnown RBP5.42□□□□□ -1.54
PTCD3-213ENST00000480102 IRAK3Q9Y616 596 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms