RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RSRC2Q7L4I2 434 aaKnown RBP11.8□□□□□ -0.52
VTI1A-204ENST00000480057 ZNF572Q7Z3I7 529 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-204ENST00000480057 SERINC5Q86VE9 423 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 TMEM192Q8IY95 271 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 C1orf127Q8N9H9 656 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 LRRC57Q8N9N7 239 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 TPCN2Q8NHX9 752 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 UBXN4Q92575 508 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 SNX27Q96L92 541 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 BCO2Q9BYV7 579 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
VTI1A-204ENST00000480057 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
VTI1A-204ENST00000480057 GTF3C4Q9UKN8 822 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
VTI1A-204ENST00000480057 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 MEFVO15553 781 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CAND2O75155 1236 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 NPTXRO95502 500 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 PGK1P00558 417 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 FTLP02792 175 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CYP1A1P04798 512 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 MMEP08473 750 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CHMP4BP1P59074 171 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 RBP5P82980 135 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CLEC16AQ2KHT3 1053 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 XKR4Q5GH76 650 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 ZNF667Q5HYK9 610 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 RNF180Q86T96 592 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CXorf38Q8TB03 319 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 ANKRD7Q92527 254 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 VCPIP1Q96JH7 1222 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 PCDHB18PQ96TA0 734 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 ARID3AQ99856 593 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 TSEN34Q9BSV6 310 aaKnown RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 TLR10Q9BXR5 811 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 AVENQ9NQS1 362 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CHST12Q9NRB3 414 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CNTN3Q9P232 1028 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 UVRAGQ9P2Y5 699 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 SIX4Q9UIU6 781 aa11.79□□□□□ -0.52
VTI1A-204ENST00000480057 CITO14578 2027 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ENC1O14682 589 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 XPOTO43592 962 aaKnown RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 FKTNO75072 461 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TRPA1O75762 1119 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 CYP1A2P05177 515 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ASGR1P07306 291 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TUBBP07437 444 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 UNGP13051 313 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 KCNE1P15382 129 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 GNA15P30679 374 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ASPAP45381 313 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 CAP1Q01518 475 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 CENPCQ03188 943 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TMEM62Q0P6H9 643 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TRIM32Q13049 653 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 GDF6Q6KF10 455 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 C11orf63Q6NUN7 778 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TMEM270Q6UE05 265 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ALKAL1Q6UXT8 129 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 GPR161Q8N6U8 529 aaKnown RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 LRRC52Q8N7C0 313 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 FAM84AQ96KN4 292 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 OSBPL9Q96SU4 736 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 SEZ6LQ9BYH1 1024 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TRIM6Q9C030 488 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ZNF518BQ9C0D4 1074 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 ABCB6Q9NP58 842 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 CISHQ9NSE2 258 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TAS2R14Q9NYV8 317 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 GINS2Q9Y248 185 aa11.78□□□□□ -0.52
VTI1A-204ENST00000480057 TRIP12Q14669 1992 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-204ENST00000480057 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.53
VTI1A-204ENST00000480057 CD4P01730 458 aa11.77□□□□□ -0.53
VTI1A-204ENST00000480057 ITGB3P05106 788 aa11.77□□□□□ -0.53
VTI1A-204ENST00000480057 PAEPP09466 180 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms