RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 AMHR2Q16671 573 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 PRSS36Q5K4E3 855 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 PLA2G2CQ5R387 149 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 PSAPL1Q6NUJ1 521 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 VITQ6UXI7 678 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
HDLBP-238ENST00000479894 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 BACE2Q9Y5Z0 518 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-238ENST00000479894 DSPP15924 2871 aaKnown RBP17.09■□□□□ 0.33
HDLBP-238ENST00000479894 CCDC163A0A0D9SF12 145 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 LRG1P02750 347 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 FGFR3P22607 806 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 CCNE1P24864 410 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 KRT85P78386 507 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 TFDP1Q14186 410 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 PDIA5Q14554 519 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 EMC2Q15006 297 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
HDLBP-238ENST00000479894 DTHD1Q6ZMT9 781 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 C4orf19Q8IY42 314 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 MTRQ99707 1265 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 NFKBIZQ9BYH8 718 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 SCAND2PQ9GZW5 306 aaPredicted RBP17.09■□□□□ 0.33
HDLBP-238ENST00000479894 KLK14Q9P0G3 267 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 CACNG4Q9UBN1 327 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
HDLBP-238ENST00000479894 A0A1B0GUA9 196 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 CASTOR2A6NHX0 329 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 SRRM3A6NNA2 597 aaPredicted RBP17.08■□□□□ 0.32
HDLBP-238ENST00000479894 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 ARNTLO00327 626 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 ZNF263O14978 683 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 SLC37A4O43826 429 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 YEATS4O95619 227 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 P4HBP07237 508 aaKnown RBP17.08■□□□□ 0.32
HDLBP-238ENST00000479894 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
HDLBP-238ENST00000479894 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 CACNA2D4Q7Z3S7 1137 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 GAB3Q8WWW8 586 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 SMARCD2Q92925 531 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 ADAM33Q9BZ11 813 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
HDLBP-238ENST00000479894 TRPV4Q9HBA0 871 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
HDLBP-238ENST00000479894 DMXL2Q8TDJ6 3036 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 WDR27A2RRH5 827 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 EML1O00423 815 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 NPTXRO95502 500 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 THP07101 528 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 TXKP42681 527 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-238ENST00000479894 STK38Q15208 465 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-238ENST00000479894 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 ANKS3Q6ZW76 656 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-238ENST00000479894 E2F7Q96AV8 911 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-238ENST00000479894 VPS45Q9NRW7 570 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 WDFY3Q8IZQ1 3526 aa17.07■□□□□ 0.32
HDLBP-238ENST00000479894 KIF26AQ9ULI4 1882 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-238ENST00000479894 NBEAQ8NFP9 2946 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 SLC26A4O43511 780 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 AKAP3O75969 853 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 YWHABP31946 246 aaKnown RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.323e-11■■□□□ 12.8
HDLBP-238ENST00000479894 NOVA1P51513 510 aaKnown RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 PKP1Q13835 747 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 SLC39A14Q15043 492 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 PDZD4Q76G19 769 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 CSGALNACT1Q8TDX6 532 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 HAS1Q92839 578 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 GATA6Q92908 595 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 AK8Q96MA6 479 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 BMP2KQ9NSY1 1161 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 LHX6Q9UPM6 363 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 SETXQ7Z333 2677 aaKnown RBP17.06■□□□□ 0.32
HDLBP-238ENST00000479894 PCNX2A6NKB5 2137 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 ATG2BQ96BY7 2078 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 AKAP13Q12802 2813 aa17.06■□□□□ 0.32
HDLBP-238ENST00000479894 NUP210Q8TEM1 1887 aaPredicted RBP17.05■□□□□ 0.32
HDLBP-238ENST00000479894 NRG2O14511 850 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms