RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PI4K2AQ9BTU6 479 aa21.97■■□□□ 1.11
COL13A1-208ENST00000479733 ACTL7BQ9Y614 415 aa21.97■■□□□ 1.11
COL13A1-208ENST00000479733 E7ENQ6 273 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 NDUFB10O96000 172 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 CYP3A4P08684 503 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ARP10275 920 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SP100P23497 879 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 POLE2P56282 527 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 PDK4Q16654 411 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 PADI6Q6TGC4 694 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SYDE1Q6ZW31 735 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ENDOVQ8N8Q3 282 aaKnown RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 RBBP8NLQ8NC74 664 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 FHDC1Q9C0D6 1143 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 A0A0G2JND7 137 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 GOLGA8RI6L899 631 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 BANF1O75531 89 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ADRB2P07550 413 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 PTPN4P29074 926 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 DOK7Q18PE1 504 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 WASHC2DQ5SRD0 308 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 FAM182BQ5T319 152 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ANKS1BQ7Z6G8 1248 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SHC3Q92529 594 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 NEU2Q9Y3R4 380 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 PI4K2BG5E9Z4 385 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 GOLGA8SH3BPF8 625 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 GOLGA8MH3BSY2 632 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 KRT36O76013 467 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 MAN1A1P33908 653 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SNX30Q5VWJ9 437 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 PHC3Q8NDX5 983 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 KLF6Q99612 283 aaPredicted RBP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ZNF577Q9BSK1 485 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 DCLRE1BQ9H816 532 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 ETAA1Q9NY74 926 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 USP20Q9Y2K6 914 aa21.96■■□□□ 1.11
COL13A1-208ENST00000479733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.96■■□□□ 1.11
COL13A1-208ENST00000479733 UBE4BO95155 1302 aa21.95■■□□□ 1.11
COL13A1-208ENST00000479733 TMEM150BA6NC51 233 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 MAGEB2O15479 319 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 ZC3H18Q86VM9 953 aaKnown RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 ZNF75CPQ92670 426 aaPredicted RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 DDX27Q96GQ7 796 aaKnown RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 CFAP57Q96MR6 1250 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 SPATA31A6Q5VVP1 1343 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 MROH7Q68CQ1 1323 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 TNRC6CQ9HCJ0 1690 aaKnown RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 ACADSP16219 412 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 RAB27AP51159 221 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 NOP14P78316 857 aaKnown RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 PPP1R15BQ5SWA1 713 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 CCDC174Q6PII3 467 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 RFWD2Q8NHY2 731 aa21.95■■□□□ 1.1
COL13A1-208ENST00000479733 CADM1Q9BY67 442 aaKnown RBP21.95■■□□□ 1.1
COL13A1-208ENST00000479733 DDTLA6NHG4 134 aaPredicted RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 KRT10P13645 584 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 KRT4P19013 534 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 PIK3CAP42336 1068 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 KPNB1Q14974 876 aaKnown RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 MAPK6Q16659 721 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 C4orf50Q6ZRC1 276 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 CLNKQ7Z7G1 428 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 ANKMY2Q8IV38 441 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 ZBED8Q8IZ13 594 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 TAB3Q8N5C8 712 aaPredicted RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 CEP120Q8N960 986 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 TAS1R2Q8TE23 839 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 MAIP1Q8WWC4 291 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 CCDC17Q96LX7 622 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 MAK16Q9BXY0 300 aaKnown RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 FDX1P10109 184 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 SCG3Q8WXD2 468 aaKnown RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 ZNF333Q96JL9 665 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 OSBPL8Q9BZF1 889 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 LARSQ9P2J5 1176 aaKnown RBP21.94■■□□□ 1.1
COL13A1-208ENST00000479733 STOML1Q9UBI4 398 aa21.94■■□□□ 1.1
COL13A1-208ENST00000479733 SLC16A4O15374 487 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ADRA1DP25100 572 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 TAS2R40P59535 323 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 SEPT7Q16181 437 aaKnown RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ATP13A4Q4VNC1 1196 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 CWF19L1Q69YN2 538 aaKnown RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 PRR5LQ6MZQ0 368 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 SCYL3Q8IZE3 742 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 NRG4Q8WWG1 115 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 HAUS1Q96CS2 278 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ACCSQ96QU6 501 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 GPRC5CQ9NQ84 441 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ZNF148Q9UQR1 794 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 PPP2R5CQ13362 524 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 HELQQ8TDG4 1101 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms