RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 LRRN2O75325 713 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 DCNP07585 359 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 RHOP08100 348 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 SRFP11831 508 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 RFX1P22670 979 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ZNF131P52739 623 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 GPC5P78333 572 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 NPAS3Q8IXF0 933 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 HS6ST3Q8IZP7 471 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 SUSD3Q96L08 255 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 PGLYRP2Q96PD5 576 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 CORO1BQ9BR76 489 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 MSTO1Q9BUK6 570 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 FOXQ1Q9C009 403 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 TBC1D17Q9HA65 648 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 TICRRQ7Z2Z1 1910 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 TBC1D4O60343 1298 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 C1RP00736 705 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 LRG1P02750 347 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 NFICP08651 508 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 CLTAP09496 248 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 GJA1P17302 382 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 AOC1P19801 751 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ELF1P32519 619 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ACOT2P49753 483 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 PPP2R3AQ06190 1150 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ADCY1Q08828 1119 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 JADE1Q6IE81 842 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 RNF19BQ6ZMZ0 732 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ZSWIM2Q8NEG5 633 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 FAM84AQ96KN4 292 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 USP28Q96RU2 1077 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 PRRX2Q99811 253 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 BACH2Q9BYV9 841 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 PLA2G2FQ9BZM2 168 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 RPF1Q9H9Y2 349 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 MRPS23Q9Y3D9 190 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 A0A087X0B3 334 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 OGTO15294 1046 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 BMP15O95972 392 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 CPB1P15086 417 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 HOXA9P31269 272 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 RPL9P32969 192 aaKnown RBP18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 CLCN5P51795 746 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 KCNA1Q09470 495 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 MRPL58Q14197 206 aaKnown RBP18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 SLC8B1Q6J4K2 584 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 ZNF461Q8TAF7 563 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 TMEM209Q96SK2 561 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 FGFBP2Q9BYJ0 223 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 CCSER1Q9C0I3 900 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 MTMR6Q9Y217 621 aa18.92■□□□□ 0.62
ECHDC1-216ENST00000479525 PIEZO1Q92508 2521 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 MYMKA6NI61 221 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 SYN3O14994 580 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 ABLIM3O94929 683 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 CCR2P41597 374 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 SNW1Q13573 536 aaKnown RBP18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 FOXD4L6Q3SYB3 417 aaPredicted RBP18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 FOXD4L3Q6VB84 417 aaPredicted RBP18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 CRISPLD1Q9H336 500 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 ARHGEF3Q9NR81 526 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 PCDHB8Q9UN66 801 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 INSL5Q9Y5Q6 135 aa18.91■□□□□ 0.62
ECHDC1-216ENST00000479525 CACNA1HO95180 2353 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 A0A0B4J269 797 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 H0YCG3 227 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 H7C4K7 107 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 GFRA3O60609 400 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 VNN2O95498 520 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 CD72P21854 359 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 DDIT3P35638 169 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 TWF1Q12792 350 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 ZBTB6Q15916 424 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 UVSSAQ2YD98 709 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 DSTYKQ6XUX3 929 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 FRMD5Q7Z6J6 570 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 GPIHBP1Q8IV16 184 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 MAP4K3Q8IVH8 894 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 WNT16Q9UBV4 365 aa18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 CPSF3Q9UKF6 684 aaKnown RBP18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 UBQLN1Q9UMX0 589 aaKnown RBP18.9■□□□□ 0.62
ECHDC1-216ENST00000479525 KIF26AQ9ULI4 1882 aaPredicted RBP18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 PATJQ8NI35 1801 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 SPTLC1O15269 473 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 SOAT2O75908 522 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 PIGRP01833 764 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 ATF2P15336 505 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 LRPAP1P30533 357 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 CASP5P51878 434 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 WNT7BP56706 349 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 GTF2BQ00403 316 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 ADALQ6DHV7 355 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 ASCL5Q7RTU5 278 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 CCDC105Q8IYK2 499 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 KCTD17Q8N5Z5 321 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms