RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 TSPAN18Q96SJ8 248 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 MTMR12Q9C0I1 747 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 GPBP1L1Q9HC44 474 aaPredicted RBP10.55□□□□□ -0.72
RAD51B-208ENST00000479335 AVENQ9NQS1 362 aaPredicted RBP10.55□□□□□ -0.72
RAD51B-208ENST00000479335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■■■ 94.1
RAD51B-208ENST00000479335 CTTNBP2NLQ9P2B4 639 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 TTC7AQ9ULT0 858 aaPredicted RBP10.55□□□□□ -0.72
RAD51B-208ENST00000479335 DERAQ9Y315 318 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 C2CD2Q9Y426 696 aa10.55□□□□□ -0.72
RAD51B-208ENST00000479335 MROH7Q68CQ1 1323 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 RPLP2P05387 115 aaKnown RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 MYL3P08590 195 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 CXCL8P10145 99 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 DARSP14868 501 aaKnown RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 PSMC4P43686 418 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 CLCN6P51797 869 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 CENPCQ03188 943 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 NOGQ13253 232 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 SLC10A6Q3KNW5 377 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 TMEM270Q6UE05 265 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 RASGEF1CQ8N431 466 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 TTC39CQ8N584 583 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 CEP120Q8N960 986 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 RBBP8NLQ8NC74 664 aaPredicted RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 ARID3AQ99856 593 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 XYLT2Q9H1B5 865 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 UPF3AQ9H1J1 476 aaKnown RBP10.54□□□□□ -0.72
RAD51B-208ENST00000479335 ARFGAP3Q9NP61 516 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 OSGEPQ9NPF4 335 aa10.54□□□□□ -0.72
RAD51B-208ENST00000479335 C17orf102A2RUQ5 167 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 KCNK3O14649 394 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 KIF3CO14782 793 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.725e-8■■■■■ 51.3
RAD51B-208ENST00000479335 CYBAP13498 195 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 P4HA1P13674 534 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CTGFP29279 349 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 GNA15P30679 374 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CXCR5P32302 372 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 OSTNP61366 133 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
RAD51B-208ENST00000479335 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 TAF2Q6P1X5 1199 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 NOTUMQ6P988 496 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 SLC27A1Q6PCB7 646 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CATSPER4Q7RTX7 472 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CDR2LQ86X02 465 aaPredicted RBP10.53□□□□□ -0.72
RAD51B-208ENST00000479335 DNAAF5Q86Y56 855 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 MCOLN2Q8IZK6 566 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CPB2Q96IY4 423 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 FAM84AQ96KN4 292 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CARD9Q9H257 536 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CYP3A43Q9HB55 503 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 SPC25Q9HBM1 224 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ACP6Q9NPH0 428 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 COG5Q9UP83 839 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 ALG6Q9Y672 507 aa10.53□□□□□ -0.72
RAD51B-208ENST00000479335 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 LSM8O95777 96 aaKnown RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 RHOXF2BP0C7M4 288 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 YY1P25490 414 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 NSFP46459 744 aaKnown RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CRYBB1P53674 252 aaPredicted RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 RBP5P82980 135 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 KIZQ2M2Z5 673 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 LIN9Q5TKA1 542 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 JADE1Q6IE81 842 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CC2D1AQ6P1N0 951 aaPredicted RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 PHF13Q86YI8 300 aaPredicted RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 USP38Q8NB14 1042 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CXorf38Q8TB03 319 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 ZNF606Q8WXB4 792 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 ZNF653Q96CK0 615 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 RHOXF2Q9BQY4 288 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 BCO2Q9BYV7 579 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 WNT8AQ9H1J5 351 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 EPC1Q9H2F5 836 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CISHQ9NSE2 258 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 LCMT1Q9UIC8 334 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM59LQ9UK28 342 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.73
RAD51B-208ENST00000479335 CCDC188H7C350 402 aa10.51□□□□□ -0.73
RAD51B-208ENST00000479335 PGRMC1O00264 195 aaKnown RBP10.51□□□□□ -0.73
RAD51B-208ENST00000479335 SEPT4O43236 478 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms