RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NTPCRQ9BSD7 190 aaKnown RBP7.29□□□□□ -1.24
USP48-208ENST00000479177 IKZF4Q9H2S9 585 aa7.29□□□□□ -1.24
USP48-208ENST00000479177 SUGCTQ9HAC7 445 aa7.29□□□□□ -1.24
USP48-208ENST00000479177 KMT5AQ9NQR1 393 aa7.29□□□□□ -1.24
USP48-208ENST00000479177 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
USP48-208ENST00000479177 TYW1Q9NV66 732 aaKnown RBP7.29□□□□□ -1.24
USP48-208ENST00000479177 SETD4Q9NVD3 440 aa7.29□□□□□ -1.24
USP48-208ENST00000479177 FANCLQ9NW38 375 aa7.29□□□□□ -1.24
USP48-208ENST00000479177 SUCLA2Q9P2R7 463 aaPredicted RBP7.29□□□□□ -1.24
USP48-208ENST00000479177 PHLPP2Q6ZVD8 1323 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 C17orf102A2RUQ5 167 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 DENND3A2RUS2 1198 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 LRRIQ4A6NIV6 560 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 PDXKO00764 312 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 GPR182O15218 404 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 TGFB1I1O43294 461 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 NDUFB5O43674 189 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 DEAF1O75398 565 aaPredicted RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 CABYRO75952 493 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 ASGR1P07306 291 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 GJB1P08034 283 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 ATP1A3P13637 1013 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 CDC25BP30305 580 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 ABCD1P33897 745 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 CTCFP49711 727 aaPredicted RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 DNM2P50570 870 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 LBX1P52954 281 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 CHMP4BP1P59074 171 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 LAMTOR4Q0VGL1 99 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 ORC1Q13415 861 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 MXD4Q14582 209 aaPredicted RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 KCNA10Q16322 511 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 NFIL3Q16649 462 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 EFCAB12Q6NXP0 572 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 NFRKBQ6P4R8 1299 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 FBXO46Q6PJ61 603 aaPredicted RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 TXNDC11Q6PKC3 985 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 RUFY4Q6ZNE9 571 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 RNF180Q86T96 592 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 IRF2BP1Q8IU81 584 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 CSGALNACT2Q8N6G5 542 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 METTL13Q8N6R0 699 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 PCSK9Q8NBP7 692 aaKnown RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 DEPTORQ8TB45 409 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 PPP1R13LQ8WUF5 828 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 SPACA7Q96KW9 195 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 ACCSQ96QU6 501 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 POP1Q99575 1024 aaKnown RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 CCDC113Q9H0I3 377 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 THAP9Q9H5L6 903 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 AGPAT3Q9NRZ7 376 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 SAMSN1Q9NSI8 373 aaKnown RBP7.28□□□□□ -1.24
USP48-208ENST00000479177 HDAC6Q9UBN7 1215 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 KCNG1Q9UIX4 513 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 TBX20Q9UMR3 447 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 TRAF3IP3Q9Y228 551 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 DNAH12Q6ZR08 3092 aa7.28□□□□□ -1.24
USP48-208ENST00000479177 GRIN2DO15399 1336 aa7.27□□□□□ -1.24
USP48-208ENST00000479177 SMIM35A0A1B0GVV1 85 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 ASAP2O43150 1006 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 TREHO43280 583 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 CALUO43852 315 aaPredicted RBP7.27□□□□□ -1.25
USP48-208ENST00000479177 PIGRP01833 764 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 VTNP04004 478 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 NR3C1P04150 777 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 EDN1P05305 212 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 CYP2C9P11712 490 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 CCL5P13501 91 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 TMOD1P28289 359 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 EFNA5P52803 228 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 ACLYP53396 1101 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 PTENP60484 403 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 ZNF200P98182 395 aaPredicted RBP7.27□□□□□ -1.25
USP48-208ENST00000479177 SPAG1Q07617 926 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 TFDP1Q14186 410 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 TPD52L1Q16890 204 aaPredicted RBP7.27□□□□□ -1.25
USP48-208ENST00000479177 HSP90AA4PQ58FG1 418 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 SLC39A4Q6P5W5 647 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 HS2ST1Q7LGA3 356 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 APTXQ7Z2E3 356 aaKnown RBP7.27□□□□□ -1.25
USP48-208ENST00000479177 RHPN2Q8IUC4 686 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 C12orf56Q8IXR9 622 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 KIAA0319LQ8IZA0 1049 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 C7orf31Q8N865 590 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 RNF149Q8NC42 400 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 GOLGA5Q8TBA6 731 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 ARMC5Q96C12 935 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 ZNF333Q96JL9 665 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 CNOT6LQ96LI5 555 aaKnown RBP7.27□□□□□ -1.25
USP48-208ENST00000479177 NLRP4Q96MN2 994 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 MAP7D2Q96T17 732 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 FAM129BQ96TA1 746 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 NFKBIZQ9BYH8 718 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 C2orf40Q9H1Z8 148 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 TMEM206Q9H813 350 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 DZANK1Q9NVP4 752 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 CGNQ9P2M7 1197 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms