RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 RBM44Q6ZP01 1051 aaKnown RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 RAPH1Q70E73 1250 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 CCDC116Q8IYX3 515 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 IFNL3Q8IZI9 196 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.642e-6■■■■□ 26.5
NUP35-209ENST00000479162 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 RAD21L1Q9H4I0 556 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 DMGDHQ9UI17 866 aaKnown RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 APOBEC2Q9Y235 224 aaKnown RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 UTP11Q9Y3A2 253 aaKnown RBP11.05□□□□□ -0.64
NUP35-209ENST00000479162 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
NUP35-209ENST00000479162 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ALX3O95076 343 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 KRT7P08729 469 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ERMARDQ5T6L9 678 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 FAM180BQ6P0A1 224 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 LRRC74BQ6ZQY2 392 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 MMGT1Q8N4V1 131 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 GMLQ99445 158 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ELAC2Q9BQ52 826 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 SLITRK6Q9H5Y7 841 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP35-209ENST00000479162 STMN3Q9NZ72 180 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 C17orf113A0A1B0GUU1 675 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 SIN3BO75182 1162 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 TRMUO75648 421 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 VCLP18206 1134 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 SCNN1DP51172 638 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 NUBP1P53384 320 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 C2orf54Q08AI8 447 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 CSTF3Q12996 717 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 RAPGEF1Q13905 1077 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 SLC44A2Q8IWA5 706 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 ZNF565Q8N9K5 539 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 TTC17Q96AE7 1141 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 CCDC138Q96M89 665 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 TM9SF2Q99805 663 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 C8orf33Q9H7E9 229 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 SH3GLB2Q9NR46 395 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ATRNO75882 1429 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 CTNND1O60716 968 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 EGFRP00533 1210 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 NPPAP01160 153 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ITGB3P05106 788 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ALDH18A1P54886 795 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 CTDSPL2Q05D32 466 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ZNF658Q5TYW1 1059 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 LRIG3Q6UXM1 1119 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 RALGPS2Q86X27 583 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 ZNF317Q96PQ6 595 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 PIP5K1AQ99755 562 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 DENND2DQ9H6A0 471 aaPredicted RBP11.04□□□□□ -0.64
NUP35-209ENST00000479162 C10orf88Q9H8K7 445 aa11.04□□□□□ -0.64
NUP35-209ENST00000479162 ADCY9O60503 1353 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 MYO3BQ8WXR4 1341 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 GABBR2O75899 941 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 PRKCAP17252 672 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 GM2AP17900 193 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 SSTP61278 116 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 VBP1P61758 197 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 PTK2BQ14289 1009 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 LEXMQ3ZCV2 418 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 KCNT1Q5JUK3 1230 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 REXO5Q96IC2 774 aaKnown RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 PPP1R14DQ9NXH3 145 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 DMTF1Q9Y222 760 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 POLR1CO15160 346 aaPredicted RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 SOX5P35711 763 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 SLC9A3P48764 834 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 PRAMEP78395 509 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 ENPEPQ07075 957 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 ZNF124Q15973 351 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 ARHGAP36Q6ZRI8 547 aa11.03□□□□□ -0.64
NUP35-209ENST00000479162 NET1Q7Z628 596 aaPredicted RBP11.03□□□□□ -0.64
NUP35-209ENST00000479162 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms