RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 LNX1Q8TBB1 728 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 COL25A1Q9BXS0 654 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 IGFLR1Q9H665 355 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 CACNG4Q9UBN1 327 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 TEX28O15482 410 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 LINC01565O15544 149 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 GADD45BO75293 160 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 NFICP08651 508 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 KLRC2P26717 231 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 PPP1R2P41236 205 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 TFF2Q03403 129 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 ITIH3Q06033 890 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 DLX2Q07687 328 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 SMAD4Q13485 552 aaKnown RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 SNRNP35Q16560 246 aaKnown RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 ZNF658Q5TYW1 1059 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 LILRA6Q6PI73 481 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 NELFCDQ8IXH7 590 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 AUTS2Q8WXX7 1259 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-217ENST00000479161 RABGGTAQ92696 567 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 MFSD14AQ96MC6 490 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 PLEKHA4Q9H4M7 779 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 DPP3Q9NY33 737 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 MTRRQ9UBK8 725 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 CD207Q9UJ71 328 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 NUB1Q9Y5A7 615 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 PCDHA5Q9Y5H7 936 aa16.75■□□□□ 0.27
C9orf3-217ENST00000479161 CALUO43852 315 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-217ENST00000479161 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 TYMPP19971 482 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 PNPLA4P41247 253 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 LILRA4P59901 499 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 CLDN10P78369 228 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 PNOCQ13519 176 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 RAB33AQ14088 237 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 PSMD6Q15008 389 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
C9orf3-217ENST00000479161 EDRF1Q3B7T1 1238 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 SLC8B1Q6J4K2 584 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 WDR49Q8IV35 697 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 ZSWIM2Q8NEG5 633 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-217ENST00000479161 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 S1PR5Q9H228 398 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 PRKAG3Q9UGI9 489 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 MAFFQ9ULX9 164 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 PCDHB8Q9UN66 801 aa16.74■□□□□ 0.27
C9orf3-217ENST00000479161 H7C4K7 107 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 OAZ2O95190 189 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 CYP11A1P05108 521 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 AP3M2P53677 418 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 SPAG1Q07617 926 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 PSMD5Q16401 504 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 DUOXA2Q1HG44 320 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 SYCE2Q6PIF2 218 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 CBWD2Q8IUF1 395 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 LRRC52Q8N7C0 313 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 HASPINQ8TF76 798 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 SUSD6Q92537 303 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 CLSTN3Q9BQT9 956 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 PLXNA3P51805 1871 aa16.73■□□□□ 0.27
C9orf3-217ENST00000479161 TCF20Q9UGU0 1960 aaKnown RBP16.72■□□□□ 0.27
C9orf3-217ENST00000479161 GOLGA8IPA6NC78 632 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 GOLGA8JA6NMD2 632 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 H3BQ06 376 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-217ENST00000479161 C2CD2LO14523 706 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 CLIC2O15247 247 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 MBTPS2O43462 519 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 EXOC3O60645 756 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 CSPG5O95196 566 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 GLUD1P00367 558 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-217ENST00000479161 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
C9orf3-217ENST00000479161 MCM4P33991 863 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 BRCC3P46736 316 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 CYP24A1Q07973 514 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 PTCRAQ6ISU1 281 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-217ENST00000479161 C15orf39Q6ZRI6 1047 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms