RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 SCP2P22307 547 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PROZP22891 400 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 RRM1P23921 792 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CTGFP29279 349 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PHKA2P46019 1235 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PLA2G4AP47712 749 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 GUCY2FP51841 1108 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CDH8P55286 799 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MAP2K5Q13163 448 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CRHR2Q13324 411 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ORC1Q13415 861 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 HIC1Q14526 733 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 BRD3Q15059 726 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 AMHR2Q16671 573 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ZNF484Q5JVG2 852 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 DCAF12L1Q5VU92 463 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 RGMBQ6NW40 437 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CCNI2Q6ZMN8 369 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 RASAL3Q86YV0 1011 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 HNRNPLLQ8WVV9 542 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 KCNN1Q92952 543 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 EMID1Q96A84 441 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 HES6Q96HZ4 224 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CGRRF1Q99675 332 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 IMPG2Q9BZV3 1241 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 DDX47Q9H0S4 455 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 C2orf40Q9H1Z8 148 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CISHQ9NSE2 258 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 LACTBL1A8MY62 500 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 KRIT1O00522 736 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TNPO2O14787 897 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 SNPHO15079 494 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SART1O43290 800 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 THAP12O43422 761 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ERLIN2O94905 339 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TMEM191BP0C7N4 346 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 UNGP13051 313 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 COMTP21964 271 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GNA15P30679 374 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 HOXA11P31270 313 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 CDR1P51861 262 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ITIH3Q06033 890 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TRPC3Q13507 836 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 CASP8Q14790 479 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SLC10A6Q3KNW5 377 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 MORN1Q5T089 497 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ACAD10Q6JQN1 1059 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 C8orf74Q6P047 294 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 C17orf99Q6UX52 265 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PAXIP1Q6ZW49 1069 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 ENOSF1Q7L5Y1 443 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TLK2Q86UE8 772 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 WDR49Q8IV35 697 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 RHOT2Q8IXI1 618 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SYCE1Q8N0S2 351 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 KRT222Q8N1A0 295 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 MMGT1Q8N4V1 131 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 C1orf127Q8N9H9 656 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 RBBP8NLQ8NC74 664 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 DNAJB3Q8WWF6 145 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ZNF606Q8WXB4 792 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 IFT81Q8WYA0 676 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 KAT2BQ92831 832 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 VTI1AQ96AJ9 217 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ZNF653Q96CK0 615 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ZSWIM1Q9BR11 485 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 NUP85Q9BW27 656 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ARHGAP39Q9C0H5 1083 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 XYLT2Q9H1B5 865 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PDZD7Q9H5P4 517 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 RPF1Q9H9Y2 349 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 EPB41L5Q9HCM4 733 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SLC5A4Q9NY91 659 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 RNF14Q9UBS8 474 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 CNOT8Q9UFF9 292 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 AMACRQ9UHK6 382 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SIX4Q9UIU6 781 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GJD2Q9UKL4 321 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 AMFRQ9UKV5 643 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ABT1Q9ULW3 272 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 GNEQ9Y223 722 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 TNFSF13BQ9Y275 285 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 STXBP5LQ9Y2K9 1186 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PPME1Q9Y570 386 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PLXNA1Q9UIW2 1896 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 CEP290O15078 2479 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TRIP11Q15643 1979 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 A0A1B0GUA9 196 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 POLR3GO15318 223 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 TREHO43280 583 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 B4GALT4O60513 344 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ERLIN1O75477 346 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GJB6O95452 261 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ITGB3P05106 788 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 C6orf222P0C671 652 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 ZNF865P0CJ78 1059 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 SMIM10L2AP0DMW4 78 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms